Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0224 ATGTTTTCGACTAATAATACTTATCATTATTATTCTCTTCTGGCCACCATTTTCTCAGTGCTAACATTGGTTTTCCCTTCAGAAGGGCAATTGAGTGCAACCTTCTATTCCACCACATGCTCCAATGTATCATCCATTGTCAGGAATTCTGTGCAGCAGGCTTTGACATCTGATTCACGTATTGCTGCAAGCCTCCTTCGTCTCCACTTTCATGATTGCTTTGTCGATGGATGTGATGGGTCCATTTTGCTGGATGTTGGTGGTAACATCACACAAAGTGAGAAAGATGCAGTTCCCAACGCCAATTCCGTTCGGGGGTATGATGTGGTTGACAGCATCAAGAGCACCGTCGAAAGTTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCACTTGCTGCAGAGTCTTCTGTGTCCCTGTCAGAAGGTCCTTCATGGACTGTATTACTTGGAAGAAGAGACAGTTTAACTGCAAACCAAGCTGGTGCCAACACCTCCCTTCCTTCTCCATTTGGAAGCCTAGACGACATCACATCCAAATTCTCTGCTGTTGGCTTAGACACAACTGATCTTGTTGCATTATCGGGTGCACACACCTTTGGTCGTTCGCAATGTCAATTTTTCTCGCAAAGATTGTTCGACTTCAATGGCACAGGAAACCCTGATCCTACCTTGAACACAACCTATTTGAGCAGTCTGCAACAAAATTGTCCACAGAATGGGAATGGTGCTACATTGAACGACCTTGATCTTTCAACCCCTGACACTTTTGACAACGACTATTTCACCAATCTTCTCATCCACAAAGGTCTTCTCCAAACAGACCAAGAACTCTTCTCCACTGATGGTGCTTCCACAATCTCCATTGTTAACAACTTTGCCAACAACCAATCTGCTTTCTTTGAAGCCTTTGCTCAGTCCATGATCAACATGGGCAACATTAGCCCTTTGACTGGAACTCAAGGACAAATCAGAACTGACTGCAAGAAAGTTAATGGAAGTTAA 1008 0.4395 MFSTNNTYHYYSLLATIFSVLTLVFPSEGQLSATFYSTTCSNVSSIVRNSVQQALTSDSRIAASLLRLHFHDCFVDGCDGSILLDVGGNITQSEKDAVPNANSVRGYDVVDSIKSTVESSCPGVVSCADILALAAESSVSLSEGPSWTVLLGRRDSLTANQAGANTSLPSPFGSLDDITSKFSAVGLDTTDLVALSGAHTFGRSQCQFFSQRLFDFNGTGNPDPTLNTTYLSSLQQNCPQNGNGATLNDLDLSTPDTFDNDYFTNLLIHKGLLQTDQELFSTDGASTISIVNNFANNQSAFFEAFAQSMINMGNISPLTGTQGQIRTDCKKVNGS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0224 335 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 ProSiteProfiles Plant heme peroxidase family profile. 30 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PANTHER PEROXIDASE 9 334 - -
Vra8g0224 335 Gene3D Peroxidase, domain 2 169 312 - -
Vra8g0224 335 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 Pfam Peroxidase 47 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Vra8g0224 335 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601|GO:0042744
Vra8g0224 335 PANTHER PEROXIDASE 72-RELATED 9 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g0224 335 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Vra8g0224 335 Gene3D - 35 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0224 Vra-Chr8 2730471 2732746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0224 13 335 Peroxidase AT5G06720 69.350 1.87e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0224 K00430 - gmx:100811249 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0036 3 354008 355459 Vra8g0224 8 2730471 2732746 PCT