Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0217 ATGGACAAGACAACATCAACAACAACAACCTCAGACAGAGAAGTCCACGACTTCATGAACGTCGACTCCTTCTCCCAACTACCCTTCATCCGCCCTGCTCCTCTCGTCAAGGAGAAGTCCGCCATTCGTCTCTTTGGCATAGAATTCGCCGGCGGAAACAACACTGCTGTTTCGCCGGACCGCTCTGACTCTGCAGAAACAACAACCAACACCAACACTAACAACCTTAACTCCTTCGAACTCGATGCTACCAAGGACGATACCACTACCACCACTGTCACCACCGTTACTGATAACAACGCCGAAACCAGTCGCAGGTTCGAGTGCCACTACTGCTGCAGGAACTTCCCCACCTCCCAAGCCCTCGGCGGTCACCAAAACGCTCACAAACGGGAACGCCAACACGCCAAACGTGCCCACCTTCAGTCAACGATGGTGCACGGAAGCACGTTCTCTGACGCCCACCATGTCTACAATCTCATGAACTACCGCTTCGGTTCCGCTCCAACACCGCCAATGCCGTATCCAACGTGGAACAACGCCGCCGCGTCCACCGCCACCAACACGAGGTTCTACGGAACGACACCGTTTTCTCACAGCCACCACCAGCACCAGCAGCCTATTAACGGAAACCCTTTGGCTCTGTGGCGAATTCCGAGCAATAACCCTAGTTTCAGCCACGAACGGTCGTCGTTGCCGCCTTTGTTCGCGTCGCAGGAGATAACGAACGTGAGAGCCTCGCAGGTTGTGGGATCCTCGGGGTCGCAAAATCGCTACGTGTATGACTCCAAACGCGGAAGTGTGCACGACCATGTGAGTTTGGATCTTCATCTGTAG 837 0.546 MDKTTSTTTTSDREVHDFMNVDSFSQLPFIRPAPLVKEKSAIRLFGIEFAGGNNTAVSPDRSDSAETTTNTNTNNLNSFELDATKDDTTTTTVTTVTDNNAETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSAPTPPMPYPTWNNAAASTATNTRFYGTTPFSHSHHQHQQPINGNPLALWRIPSNNPSFSHERSSLPPLFASQEITNVRASQVVGSSGSQNRYVYDSKRGSVHDHVSLDLHL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0217 278 SUPERFAMILY beta-beta-alpha zinc fingers 104 135 IPR036236 -
Vra8g0217 278 MobiDBLite consensus disorder prediction 55 78 - -
Vra8g0217 278 MobiDBLite consensus disorder prediction 52 78 - -
Vra8g0217 278 PANTHER ZINC FINGER PROTEIN GIS 1 278 - -
Vra8g0217 278 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Vra8g0217 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Vra8g0217 278 PANTHER ZINC FINGER PROTEIN GIS 1 278 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0217 Vra-Chr8 2555839 2557026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0217 9 278 C2H2 Transcription Factor Family AT2G41940 39.362 1.46e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0217 - - vun:114190818 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0050 3 565482 566516 Vra8g0217 8 2555839 2557026 PCT