Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0207 ATGGCAGTGGCCTCTTCATTCTCACGCCGCTTGTTCATAAAACCGTTTCCCCTCTTCTCTTTCTATTTCTCATTCTCCACCGCTTCGCCATCTCCGCCTCCGATCCGAGTCGCGCTCACCGAGTCCGTCGGCCGCGCGGTCTTCGCCACGCGCCCCATCGCCGCCGCTGACCTCATCCACACCGCCAGTCCCGCCGTTTGCCATCCCTACTCCGGCCGCGCCTCCTGCTACTCCTGTCTCGCCGCGCTCCCCCACTCCCAACCTCTCCGCGCGCCCTTTTGCAGCCAACATTGCCACCAACGATCCAAGGGATATTACGATGTTGAGATGAAAGCAAATTGGGTGGCTTTTGATGACTATTGTGGGTCTCGTGGTTTGAAGTATCCCTTTCTGGTAAAGCGATTGGCTTGCATGGTCATAGCAGGAGATGCCAGAAGTGACAGTCTTGACATACTCCAGCCTGCCAATTTTACTCCTGAGATGGTATCAAAGATGGAAGAGGAGTTTGTCTTGCTAAGGAATGCCTTTGCGGAGGCACTTATTGGAGATGATCATATTGCCTTTTTAACCAAGCAATGGTACATTAATGTTTTGGCTCGAATTCGAATCAATGCATTTCGCATTGAGTTGGTCGGAGGACTGTATGAAGATCTTCTTTCATTAGCTGTTGCATCTGTCGAAGCTGAGGCTGCTGTTGGAAATGCTGTCTATATACTTCCGTCCTTCTACAATCATGATTGTGATCCTAATGCACACATCATATGGATAGATAACGCTCATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGATCGTGATGCCAGAAGAGAGCTTCTGTTTCAAGGTTTTGGTTTTCAATGCAATTGTAGTAGGTGCTTACATGGCGATTAA 933 0.493 MAVASSFSRRLFIKPFPLFSFYFSFSTASPSPPPIRVALTESVGRAVFATRPIAAADLIHTASPAVCHPYSGRASCYSCLAALPHSQPLRAPFCSQHCHQRSKGYYDVEMKANWVAFDDYCGSRGLKYPFLVKRLACMVIAGDARSDSLDILQPANFTPEMVSKMEEEFVLLRNAFAEALIGDDHIAFLTKQWYINVLARIRINAFRIELVGGLYEDLLSLAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNAHAKLKALRDIDEGEELRICYIDASLDRDARRELLFQGFGFQCNCSRCLHGD* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0207 310 Pfam SET domain 44 279 IPR001214 GO:0005515
Vra8g0207 310 Gene3D - 75 123 - -
Vra8g0207 310 Gene3D - 124 205 - -
Vra8g0207 310 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 41 307 - -
Vra8g0207 310 SMART set_7 33 286 IPR001214 GO:0005515
Vra8g0207 310 SUPERFAMILY SET domain 33 306 IPR046341 -
Vra8g0207 310 CDD SET_SMYD 233 306 - -
Vra8g0207 310 ProSiteProfiles SET domain profile. 33 280 IPR001214 GO:0005515
Vra8g0207 310 Gene3D SET domain 46 306 IPR046341 -
Vra8g0207 310 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 41 307 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra8g0207 SET 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0207 - - gmx:100801270 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0207 8 2423210 2427989 Vra8g0207 8 2423210 2427989 ECH