Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0175 ATGGCTATTCCTCCACACATAGTGGAAGACTGCATGGGCCTCCTCAAACTCTTCAGTGATGGCACCGTTTTTCGTTCCAATATTCAGTTCCAAGAACAACCCTCATCCACCCAACAACACAACAACCTCGTACTCTTCAAAGATTACATCTTTCACAAGAAATTCGACCTCCACCTCCGTCTCTACAAACCTAAACTCGATAACGATGATAATGGTGCTGAGAGCAAGGAGAAGCTACCGGTGCTAATGTTCCTCCACGGTGGGGGCTTCTGCTTCGGGTCGCACGCGTGGCCGCACATTCATGCATGTTGTGCACGTCTCGCCGTGGATCTCCGTGCGGTTGTGGTGGCGCCGGACTATCGCCTGGCACCGGAGCACCGCCTTCCCGCGGCGGTGGACGATTGCGTGGAGGCTGTGCAGTGGCTGAAGAGGCAGGGACATGGCGGGGACTCGTGGGTGACGCGCCGCGTTGACTTTGAGCGCGTGTTTGTGTTTGGCGACTCGTCTGGCGGGAACATTGCGCACCACTTGGCGGTTCAGCTCGGATCCGGTTCGAGAGAGATGGACCCGGTTCGAGTACGAGGTTACGTGTTGATGGGCCCATTTTTCGGTGGGGTGGTTCGGACCAAGTCCGAGGTGGGCCCACCGGAACAAATGCTGACACTTGATTTGCTGGACAGATTTTGGAGACTGTCAATACCTGTTGGAGAGAATAGAGATCACCCATTGGTAAACCCCTTTGGCCCTAATAGTCAGAATCTTGCAGAAGTGAAGCTTGATCCTATTTTAGTGATAGTTGGTGGCAATGAATTGCTGAAGGACAGAGCAAAAGACTATGCAACAAGGTTAAAGGAACTAGGGAAGAACATTGAATACGTTGAGTTCAAGGACAAGGAACATGGCTTTCTCACTCATGATTCATCCTCACAGGTTGTCCAAGATCTTCTGCAAATCGTCAAACAATTCATGCTTCAAAATTCTAGTTAG 987 0.5127 MAIPPHIVEDCMGLLKLFSDGTVFRSNIQFQEQPSSTQQHNNLVLFKDYIFHKKFDLHLRLYKPKLDNDDNGAESKEKLPVLMFLHGGGFCFGSHAWPHIHACCARLAVDLRAVVVAPDYRLAPEHRLPAAVDDCVEAVQWLKRQGHGGDSWVTRRVDFERVFVFGDSSGGNIAHHLAVQLGSGSREMDPVRVRGYVLMGPFFGGVVRTKSEVGPPEQMLTLDLLDRFWRLSIPVGENRDHPLVNPFGPNSQNLAEVKLDPILVIVGGNELLKDRAKDYATRLKELGKNIEYVEFKDKEHGFLTHDSSSQVVQDLLQIVKQFMLQNSS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0175 328 Coils Coil 269 289 - -
Vra8g0175 328 Gene3D alpha/beta hydrolase 14 327 IPR029058 -
Vra8g0175 328 Pfam alpha/beta hydrolase fold 82 303 IPR013094 GO:0016787
Vra8g0175 328 SUPERFAMILY alpha/beta-Hydrolases 4 323 IPR029058 -
Vra8g0175 328 PANTHER CARBOXYLESTERASE 15-RELATED 4 324 - -
Vra8g0175 328 PANTHER ARYLACETAMIDE DEACETYLASE 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0175 Vra-Chr8 2051916 2054652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0175 7 323 Carbohydrate Esterase AT5G16080 35.650 2.37e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0175 - - gmx:100801473 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0175 8 2051916 2054652 Vra8g0175 8 2051916 2054652 ECH
Vra3g0632 3 6895551 6898295 Vra8g0175 8 2051916 2054652 PCT