Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0149 ATGGGTTTTCGTTTACCTGGTAGCAAAAAAACATTATTTGCAGTCAGTCAAGCGTCTTCAAGAGCAGCAAATGCACCAAAAGGCTACCTTGCGGTGTATGTTGGAGAGAAAATGAAGCGGTTCATGATCCCTCTGTCATACTTGAACCAACCTTCCTTCCAAGACTTGCTGAGTCAAGCTGAAGAAGAGTTTAGATATGAGCACTCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCAACCAGTTGCGGTGTGAAGAAGAAGAAGATGATGATGATGGAGTGGAGGCGGATGTGGAAGAAGACGATGGGCTGGAGTGGAGGTGGAAGATGGGTGTGGAGGAAGAAAGTATGCAGATGCAGCAAGAAATTTTTTAA 384 0.4557 MGFRLPGSKKTLFAVSQASSRAANAPKGYLAVYVGEKMKRFMIPLSYLNQPSFQDLLSQAEEEFRYEHSMGGLTIPCSEDVFNQLRCEEEEDDDDGVEADVEEDDGLEWRWKMGVEEESMQMQQEIF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0149 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 86 IPR003676 GO:0009733
Vra8g0149 127 PANTHER AUXIN-INDUCED PROTEIN 6B 1 86 - -
Vra8g0149 127 Pfam Auxin responsive protein 16 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0149 Vra-Chr8 1691173 1693406 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0149 14 100 Calmodulin-binding Proteins AT3G43120 43.182 2.25e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0149 - K14488 gmx:100797634 144.436