Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0148 ATGGGCTTCCGTTTACCCGGTATCAGAAGGACTTCATCTGGCAGAAATCAAGCATCTTCAAAAGTGTTGGATGCGCCAAAGGGATGCCTTGCAGTCTATGTGGGAGAGAATATGAAACGGTTTGTGATTCCTGTATCACACTTGAATCAACCTCTATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAACATGTCTTCCAACATATTACTTCTTGTTTGTATGGACAATAA 279 0.4337 MGFRLPGIRRTSSGRNQASSKVLDAPKGCLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQHITSCLYGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0148 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Vra8g0148 92 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Vra8g0148 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Vra8g0148 92 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0148 Vra-Chr8 1676780 1677497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0148 24 89 Calmodulin-binding Proteins AT5G20810 53.030 4.89e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0148 K14488 - gmx:100820621 158.303