Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0129 ATGGCGGATAAGCAACCCCCACTAAACGGTGCGTATTACGGCCCCGCGATTCCTCCCGCGGAGGCGCCACGTCCCCGCCGCCATAGAAATTGCTGCTGCTGCCTCTTCAGCATCTGCTGGAAGATTCTCCTCGCACTCATAATCTTCCTCGTCATCGTATTCATCATCTTCTACGCCGTGTTCCAGCCACGCGCCTTTAAGCTGCACGTCTCCGACGCCACGCTCACGCAGTTCAACTACACCTCCAGCGACAACACGCTCCGTTACAACCTCGTCCTCAACTTCACGGCAGGGAACCCCAACAAGAAGCTGGACTTCTACTACGAGAGCGTGGAGAGCCACGTGTCATACAACGGCGTCACGTTCGCGTCGACGGAGGTTTTGACGTTGCGTGACTCTTTCCGGCAACGCAGGAAGAGCACGAACCGTCTGAACGGCGTTTACAGGGGTAATTACAAGACGGTGTTGGATGAGGATGAGGTGAAGAGCTTGGAAGAAGATGAGAAAAAAAGGGTTTTTCATTTCTCTGTGAGACTGAACTTTAAGATTAAGTTCATGATTAATGACTCGGCAGGTTCTAGCACGAAGGCGAAGGCAAAATGTGAGCTTGAGGTCCCTTTGAGTTCGAAAGGAGAAACTCCAGTAGGGACTGTGTTTGTATCCACCTACTGTCGTGTCCATTTCTGA 687 0.5226 MADKQPPLNGAYYGPAIPPAEAPRPRRHRNCCCCLFSICWKILLALIIFLVIVFIIFYAVFQPRAFKLHVSDATLTQFNYTSSDNTLRYNLVLNFTAGNPNKKLDFYYESVESHVSYNGVTFASTEVLTLRDSFRQRRKSTNRLNGVYRGNYKTVLDEDEVKSLEEDEKKRVFHFSVRLNFKIKFMINDSAGSSTKAKAKCELEVPLSSKGETPVGTVFVSTYCRVHF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0129 228 PANTHER OS05G0367900 PROTEIN 25 225 IPR044839 GO:0098542
Vra8g0129 228 Pfam Late embryogenesis abundant protein 96 185 IPR004864 -
Vra8g0129 228 PANTHER PROTEIN, PUTATIVE-RELATED 25 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0129 Vra-Chr8 1439442 1440316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0129 18 205 EF-hand Containing Proteins AT5G21130 27.179 6.01e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0129 - - gmx:100788062 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0129 8 1439442 1440316 Vra8g0129 8 1439442 1440316 ECH
Vra3g0598 3 6531091 6531915 Vra8g0129 8 1439442 1440316 PCT