Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0128 ATGGCTGATACACAGCCGCCGCAGCCGAACACCGCCGCAGCAAACGACGCCGCTTCCGTTCCTTCAAAGGAGCGTCTCCGCACAAGATGCTGCTACTGTCTCTGCAAAACCTTGTGGATCTTTCTGGTACTCGTTATCGTCCTCGTCATGCTCGTGATTTTGGTTTTATACATCATCATCACACCCCGCTCCTTCAGATTCCACGTCACTGACGCTAGCCTCACGCAATTCGATTACGCTGCCAACTCCACCCTTCGCTACAACCTCGTACTCAACATCACAGCAAGCAACCCTAACAAGAGGCTCAAGATCTACTACGACGTCGTTCGGGCCAACGCGTTCTACGGCGGCGTTAGGTTTTCCACCACCGACGTCAACATGCCCTGGAATTCCTACCTTCAGGACAAGAAGGGCACCAACCTTTTCAGCGCGGTTTTCTCGGGACAACGTGTGGTGGTGTTGGATAGGGACGAGGTTTCTGAGTTTGATGAAGATAACAAGAATGGGGTGTTCCCTATAGATGTTATGATTGGTTTCACCATTAGGTTCAGGCTTGAAGCTTTTCAGTTTGGGTATTACTATCCCAGAGGCATGTGTAAACTCAAAGTTCCTTTGACTTCTAAGGGAGACAAGGTGGCTCCGTTTAAGGCCACCAAGTGCCGAATTGATTTCTGA 675 0.5022 MADTQPPQPNTAAANDAASVPSKERLRTRCCYCLCKTLWIFLVLVIVLVMLVILVLYIIITPRSFRFHVTDASLTQFDYAANSTLRYNLVLNITASNPNKRLKIYYDVVRANAFYGGVRFSTTDVNMPWNSYLQDKKGTNLFSAVFSGQRVVVLDRDEVSEFDEDNKNGVFPIDVMIGFTIRFRLEAFQFGYYYPRGMCKLKVPLTSKGDKVAPFKATKCRIDF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0128 224 PANTHER OS05G0367900 PROTEIN 21 223 IPR044839 GO:0098542
Vra8g0128 224 PANTHER PROTEIN, PUTATIVE-RELATED 21 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0128 Vra-Chr8 1432749 1433808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0128 59 205 SNARE and Associated Proteins AT1G32270 34.228 2.57e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0128 - - gmx:100787531 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0597 3 6522264 6532116 Vra8g0128 8 1432749 1433808 PCT