Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0127 ATGGCCGAAACACAACCTCAACCGAACATCCCCGCAACCAACGACGTCGTATCGGCTCCTACAAAGGAGCACCTCGGAACAAGATGCGGCTATTGTCTCTGCAAAACCTTCTGGATTTTTCTGGTCCTCGTTATCATTCTCGTTATGCTTGTGATTTTGGTCTTATACATCATCATCACACCCCGCTCCTTCAGATTCCACGTCACCGACGCCAAGCTCACGCAATTCGATTACGCCGCCAACACCACCACCCTCAGCTACAATCTCGTACTCAACATCACAGCAAGCAACCCTAACAAGAAGCTCAAGATCTACTACGACGTCGTTCGGGCCAACGCACTCTACGGCGGCGTTAGGTTTTCCACCAGCAAAGTCAACATGCCATGGAATTCCTACCTTCAGGACAAGAAGAGCACCAACCTTTTCAGCGCGGTTTTCTCGGGACAACATGTGATGGTGTTCGATCGAAACCAGGTTTCTGACTTCAATGAAGATAGCAATGATGGGGTGTTCCCTATTGATATAAAAATCAAGTTTCGTATCAGATTCAGGCTTGGGGATTATATTTCTGGGCACTTCAATGCCAGAGCCACGTGCGAGCTCAACGTTCCTTTCACTGATTCCGATGGGAAAACGGTGGCTGCGACTGCGTTTGAGTCCACCAAGTGCCAAGTCGATTTCTGA 684 0.4898 MAETQPQPNIPATNDVVSAPTKEHLGTRCGYCLCKTFWIFLVLVIILVMLVILVLYIIITPRSFRFHVTDAKLTQFDYAANTTTLSYNLVLNITASNPNKKLKIYYDVVRANALYGGVRFSTSKVNMPWNSYLQDKKSTNLFSAVFSGQHVMVFDRNQVSDFNEDSNDGVFPIDIKIKFRIRFRLGDYISGHFNARATCELNVPFTDSDGKTVAATAFESTKCQVDF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0127 227 PANTHER PROTEIN, PUTATIVE-RELATED 20 226 - -
Vra8g0127 227 Pfam Late embryogenesis abundant protein 93 198 IPR004864 -
Vra8g0127 227 PANTHER OS05G0367900 PROTEIN 20 226 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0127 Vra-Chr8 1425824 1426507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0127 58 206 SNARE and Associated Proteins AT1G32270 28.859 9.71e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0127 - - ccaj:109813660 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0595 3 6513829 6514918 Vra8g0127 8 1425824 1426507 PCT