Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0116 ATGAAGTTCTTTTCTCGTCTCAAAAATAACAACACCACCAACAACCACCACAGATCCTCCTGGCCATGGCCCTCTTGCCACCAACCCAGAACCCTCTCATTCAGAGCTACCACCGCCAGCGCCACCACCACCACAACCACCACCACCACTCCCACTCATGACATTTTCAAAGGCTCCAACTCCATCGCTCAAACTCCGGACTCCTTCTTCACTGACTCACCTAACTCCGACAGTTTCTCCACTGCGTCCGACATATCCCACACCGTGGACTCCACCGAAACGGTTATTCGAGGCCTCCGCTCCGACCGCCTTTTCTTCGAACCGGACCCGACCAGCTCCTTATGGGAAGCGAAACTCGCCACCCTCCCACCCTTCAAAAACAGCGTGGTTTTCTCCATGGACTCCACGCACCCTTACGTGGATTTCCGCCGCTCCATGGAAGACATGGTGGCCACACACAGCGTCAGAGACTGGGAGGATCTCGAGGACCTTCTCTGCTGGTTCTTGAAGGTCAATGCAGAAAACACTCACCACTACATCCTCCGTGCTTTCGTCGATTTCTTGTTCTCTCTAGCACTTGCTTCTTCTTCTTCCAACGCCATTTGTAGTACCACCACCACTCTCTCTTCTCTCTCTTCTTCTTCTTCCTCTTGCACCACTCGCTGCACTTTCTGTATCGAGGAAGAGCTTCAACACCAACACATTTCTTAA 711 0.5246 MKFFSRLKNNNTTNNHHRSSWPWPSCHQPRTLSFRATTASATTTTTTTTTPTHDIFKGSNSIAQTPDSFFTDSPNSDSFSTASDISHTVDSTETVIRGLRSDRLFFEPDPTSSLWEAKLATLPPFKNSVVFSMDSTHPYVDFRRSMEDMVATHSVRDWEDLEDLLCWFLKVNAENTHHYILRAFVDFLFSLALASSSSNAICSTTTTLSSLSSSSSSCTTRCTFCIEEELQHQHIS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0116 236 MobiDBLite consensus disorder prediction 1 24 - -
Vra8g0116 236 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 219 - -
Vra8g0116 236 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 129 192 IPR006458 -
Vra8g0116 236 Pfam Transcriptional repressor, ovate 135 191 IPR006458 -
Vra8g0116 236 MobiDBLite consensus disorder prediction 39 58 - -
Vra8g0116 236 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 219 IPR038933 GO:0045892
Vra8g0116 236 ProSiteProfiles OVATE domain profile. 131 190 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0116 Vra-Chr8 1276021 1276907 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra8g0116 Ovate 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0116 - - pvu:PHAVU_007G269900g 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0585 3 6436938 6438108 Vra8g0116 8 1276021 1276907 PCT