Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0105 ATGGCAACAAGCGAAGAAGTGGTTGCGGCGGCGCCGGCGCCGGAGGCAGGGCTGAAGCACAAGCTGGAGCGAAAATGGACGTTTTGGTGCGACAATCAATCCAAACCTAAACAGGGCGCTGCTTGGGGAACCTCTCTGCGCAAGGTCTACACTTTCGACACTGTAGAAGAGTTCTGGTGTTTGTATGATCAGATATTTAAGCCCAAGGAGTTGCAAAACAACGCGGATTTTCACTTGTTCAAGGCTGGTATTGAACCTAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTCACCAGCAACATCGGCCGGAAGGATAACCTTGAGAAGATGTGGCTTGAAACTCTGATGGCGTTGATTGGGGAGCAATTTGATGATGCTGAGGACATATGCGGTGTGGTTGCTAGTGTGCGCCAATGGCAAGACAAACTTTCACTGTGGACAAAGACAGCGGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATACAACTTTCATGATGACTCTAGAACCAAAGGAGCAACAAAGGGTCGATACACCGTATAA 594 0.4865 MATSEEVVAAAPAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPKELQNNADFHLFKAGIEPKWEDPECANGGKWTVTSNIGRKDNLEKMWLETLMALIGEQFDDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKITYNFHDDSRTKGATKGRYTV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0105 197 ProSitePatterns Eukaryotic initiation factor 4E signature. 76 99 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vra8g0105 197 Gene3D RNA Cap, Translation Initiation Factor Eif4e 14 197 IPR023398 -
Vra8g0105 197 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 6 187 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vra8g0105 197 PANTHER BNAA08G29940D PROTEIN 6 187 - -
Vra8g0105 197 SUPERFAMILY eIF4e-like 8 190 IPR023398 -
Vra8g0105 197 Pfam Eukaryotic initiation factor 4E 21 179 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0105 Vra-Chr8 1140174 1142793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0105 1 197 Eukaryotic Initiation Factors Gene Family AT5G35620 65.366 6.86e-86 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0105 K03259 - gmx:100499799 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0105 8 1140174 1142793 Vra8g0105 8 1140174 1142793 ECH