Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0081 ATGGCAGGAGAACTAAGAGTGTTGAATGCACTTGATGTGGCGAAGACACAATGGTACCACTTCACAGCAATTGTGATAGCAGGAATGGGTTTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTGGTTACTAAGCTGTTAGGGAGACTATACTACACAGAACCAGGTGCACCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAAGCTTCTGTCACTGGCGTTGCACTATGTGGAACCTTAGCTGGTCAACTATTCTTTGGTTGGCTTGGTGACAAATTGGGGAGAAAAAGGGTCTATGGTCTCACTCTTGTGCTCATGGTGGTGTGCTCCCTTGCCTCAGGACTCTCCTTTGGCTCCACTCCAAAGGGTGTCTTGGCCACACTTTGCTTCTTCAGATTCTGGCTAGGGTTTGGGATTGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAAAAGACTCGTGGGGCATTCATTGCAGCAGTGTTTGCCATGCAAGGGTTTGGAATCTTGGCTGGTGGAATAGTCGCCTTGATTGTTTCTTATGCATATGACCAAAAGTACAACCTTCCCACATACGAACAAAATCCAGAAGCATCCATCGTGCAGTCATTTGACTATGTTTGGAGAATCATTTTGATGTTTGGTGCAATTCCGGCAGCACTGACCTACTACTGGCGCATGAAAATGCCTGAGACTGCACGTTACACAGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAAGTGTTGCAAGTGGAACTTGAAGCTGAAGAGGAGAAGGTGCAGAAACTGACACAGGGGGAGAGCCACAGATATGGTTTGTTCAGCAAGGAATTTCTCAGACGCCATGGCCTGCATTTGGTTGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTCTTCCAAAAAGACATCTTCAGTGCAATTGGGTGGATCCCTCCAGCAAAGACAATGAATGCAATTCATGAGGTATACAGGATTGCAAGAGCACAAACACTGATAGCATTGTGCAGCACTGTGCCAGGTTACTGGTTCACAGTGTTTCTGATTGATCACATTGGCCGTTTTGCTATCCAATTGATTGGGTTCTTCTTCATGACAGTGTTCATGTTTGCTTTGGCTATACCATATGATCATTGGACTGAGAAAGCAAACAGAATAGGGTTTGTGGTGATATACTCCCTGACCTTTTTCTTTGCCAACTTTGGTCCAAATGCGACGACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTTAGGTCAACCTGTCATGGAATATCTGCAGCTGCAGGAAAGGCTGGTGCAATTGTGGGAGCATTTGGGTTCCTATATGCTGCACAAAGCAAGGACCCTAAAAAGACTGATGCAGGGTACCCTACAGGAATTGGGGTTAAGAACTCACTCATTGTGCTTGGTGTTATCAACTTGCTTGGAATGTTGTTCACCTTGTTGGTTCCAGAATCAAAGGGTAAGTCACTGGAGGAGTTGAGTGGGGAGAATGATGGAAGTGCTGATGCTGAGCCTGAAGTTTCTGATAGGACAAATCGTGTTTGA 1605 0.4617 MAGELRVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAPKPGTLPPRVQASVTGVALCGTLAGQLFFGWLGDKLGRKRVYGLTLVLMVVCSLASGLSFGSTPKGVLATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSYAYDQKYNLPTYEQNPEASIVQSFDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVQKLTQGESHRYGLFSKEFLRRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIHEVYRIARAQTLIALCSTVPGYWFTVFLIDHIGRFAIQLIGFFFMTVFMFALAIPYDHWTEKANRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPTGIGVKNSLIVLGVINLLGMLFTLLVPESKGKSLEELSGENDGSADAEPEVSDRTNRV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0081 534 CDD MFS_PhT 24 506 - -
Vra8g0081 534 TIGRFAM 2A0109: phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Vra8g0081 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Vra8g0081 534 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 524 - -
Vra8g0081 534 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Vra8g0081 534 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Vra8g0081 534 Gene3D MFS general substrate transporter like domains 269 529 IPR036259 -
Vra8g0081 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 524 - -
Vra8g0081 534 Coils Coil 250 277 - -
Vra8g0081 534 MobiDBLite consensus disorder prediction 510 534 - -
Vra8g0081 534 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0081 Vra-Chr8 878756 881455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0081 1 518 Inorganic Solute Cotransporters AT3G54700 81.310 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0081 K08176 - gmx:100780201 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0183 3 2133115 2136366 Vra8g0081 8 878756 881455 PCT