Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0014 ATGTTTGGAAGAACACTCAGCGTCTGTAATTGGTGTGGAAGAGTAGCACCATCTTTGTTTTTCCCACTTTATCTTCCAAATCTTAATCGTAATCCATTTTGTTTATTGTCAACGCTCATCACTCCAACTCTAACAACGCTTCCCCTCACTGCAAGAAGGTTTTCATTTTCACCACTTTCACCAATGGATGACGAAAACCAAGCCACAGAGCAGGAATACGCCTTTCACTCCGACCTGCTCCACCAATTCACCGCCATCCCCTCCGTCGACAAGGCATGGATCTTCAACTCCCGCGCCGGTTTGGCTTCGCAGGCAATGTTTTGCGTTAGTCAACCCAACCTTTTGACCAACAAGAGGAAGAAGTCCATCCTCTCCGCTTCCCTGCTCAGACAAAGCGACGGCACCGTTGCGTTTCACTGGGCTCCCTTTCCGATCGAATTGAGCGGAGTCTNCGCCATGGTTCCGTCGCCTTCTGCCTCCAAGCTGCTGATTGTTCGGAATCCCGAGAATGAAGGTCCTTGCCGCTTTGAAATTTGGAGCTCCTCTCAACTGGAAAAGGAGTTCCATGTCCCTCAATCTAAGCACGGTTCTGTGTACACTGATGGATGGTTTGAGGGGATCTCTTGGAATTTGAATGAAACTTGTATAGCGTATGCAGCTGAAGAGCCAGCTCCTCCAAAGCCCACATTCAATGATCTAGGTGGCTACCAGAAACTTAGTTCTTCAGACAAGGATGGTGGTACCTGGAAAGCTCAAGGAGAATGGGAGGAAGAATGGGGAGAGACGTATGCAGGGAAGAGGCAGCCTGCCCTTTTTGTCATCGACATAACTAGTGGAGAGGTACAGGCCGTCAAAGGAATTGACAAGTCTTTGAGTGTTGGACAAGTTGTGTGGGCTCCAGCAACCGAAAGCTCTGTGCAATATTTGGTCTTTGTTGGATGGTCATTTAAGACAAGAAAACTTGGTATTAAGTACTGTTATAACAGGCCATGTGCATTATATGCTGTTAAAGCACCACACCATGACTCAAAAGCAAATGAAACTGAGACGTACTCAACTGAAGATGTTCAGGCTGTTAACCTAACTCAAACCTTAAGTAGTGCTTTCTTTCCACGGTTCAGCCCGGATGGAAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGCGCCCACTCTGCTACAGATTCACTTCATAGAATGGATTGGCCTAAGGATATGAAGCTTTATCAATCTTCTAAAATTCATGAAGTGATTCCAGTTGTGTTGTTTGCGGAGGATGGCAGCTTCCCAGGGCTTTACTGTTCAAATATCCTTAGTGATCCATGGCTTATCGATGGCCAGACCTTAGTTATAGCTTCTGTATGGCACAGCAATCAAGTTTTACTTTCCATCAATGTGCTGAGTGGAGAAATATTGCGAATCACCCCTGATAACTCAAATTTCTCTTGGAGTCTTCTTACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGACGTTCCTCAAATCAAGTATGGAGCTATTGTTAAAAATACAACTAATGATAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTTAAGTGCTCAGAAAAGGTTAGGTCATCGGTCTCGTCTCTTACATCCTGTATAATGAAGATCTCAGTCAAGGATGCTTCTGAAAGCTTAACAAAAGGTGCTAGTCAACCTTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGAGGCATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCACATTCTCTCTTATTGTCAAGCTTTTCAAGGCCATTGGCTTATCTTTCTTCAGTTGGATATAGCTTGTTAATTGTTAATTACAGAGGCTCAGTAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGAAAAGTTGGCTCTCAGGATGTCAACGATGTGCTCACTGCTATTGATCATGTCATTGATTTGGGACTCGCCAGTCCTTCAAAGATTGCAGTTCTTGGTGGCTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCTGAGAAATTTGTTGCAGCCGCTGCTAGGAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTGGAGACCTATGGAACCGAGGGTAGAGACAAGTTTACTGAAGCACCTTCAGCAGCGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGCAAAAACACCAACGCTTTTTCTACTTGGTGCCCAAGATCTCCGTGTTCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACCAACAAAAGTCATCTTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAGTCCGACTTTGAAAGCTACCTTAACATTGCGATCTGGTTTAACAAGTATTGCAAATGA 2466 0.442 MFGRTLSVCNWCGRVAPSLFFPLYLPNLNRNPFCLLSTLITPTLTTLPLTARRFSFSPLSPMDDENQATEQEYAFHSDLLHQFTAIPSVDKAWIFNSRAGLASQAMFCVSQPNLLTNKRKKSILSASLLRQSDGTVAFHWAPFPIELSGVXAMVPSPSASKLLIVRNPENEGPCRFEIWSSSQLEKEFHVPQSKHGSVYTDGWFEGISWNLNETCIAYAAEEPAPPKPTFNDLGGYQKLSSSDKDGGTWKAQGEWEEEWGETYAGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPATESSVQYLVFVGWSFKTRKLGIKYCYNRPCALYAVKAPHHDSKANETETYSTEDVQAVNLTQTLSSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRMDWPKDMKLYQSSKIHEVIPVVLFAEDGSFPGLYCSNILSDPWLIDGQTLVIASVWHSNQVLLSINVLSGEILRITPDNSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKNTTNDKEWSWSDVSNPIFKCSEKVRSSVSSLTSCIMKISVKDASESLTKGASQPYEAIFVSSKTKKSEACDPLIVVLHGGPHSLLLSSFSRPLAYLSSVGYSLLIVNYRGSVGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTEGRDKFTEAPSAADLTLFYSKSPISHLSKAKTPTLFLLGAQDLRVPISTGLQYARALREKGVPTKVILFPNDVHGIERPQSDFESYLNIAIWFNKYCK* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0014 821 Pfam Prolyl oligopeptidase family 604 820 IPR001375 GO:0006508|GO:0008236
Vra8g0014 821 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 69 342 IPR045550 -
Vra8g0014 821 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 65 821 - -
Vra8g0014 821 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 65 821 - -
Vra8g0014 821 SUPERFAMILY alpha/beta-Hydrolases 586 820 IPR029058 -
Vra8g0014 821 Gene3D - 340 552 IPR011042 -
Vra8g0014 821 Gene3D alpha/beta hydrolase 565 819 IPR029058 -
Vra8g0014 821 ProSitePatterns Prolyl endopeptidase family serine active site. 649 679 IPR002471 GO:0004252|GO:0006508
Vra8g0014 821 SUPERFAMILY DPP6 N-terminal domain-like 146 507 - -
Vra8g0014 821 Pfam WD40-like Beta Propeller Repeat 361 391 IPR011659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0014 Vra-Chr8 198319 208643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0014 588 804 Carbohydrate Esterase AT5G36210 25.806 3.63e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0014 K01303 - gmx:100803600 1344.33