Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0013 ATGCCACTGTTCATTCATGTTCTTCACTATATTATTTCTCATCTTTTGTGGGCCAAGGTGTTGATCCCCTGCTTGGAAATGCATAAGGAAGCTGAGGATGACTATGCCCGCCTTTCTAGCTTACTTCAAGAGTTCACCAGTATTCCCAACATTGACAAGGCATGGCTTTTTAGCTCTCCAGGGTTGCACTTGCAAGGAATGTTTGCAGTTTCCCAATCAGATCTTTTAACAAACACGAGGAGGACATCCATCATGTCCTGTAACATTCTAAAAGAAAGGGACAGTTCTGTGAAGTTTCTGTGGGCTCCGTTTCCAATAGAGATGTCTGGCGTGTCCATGATTGTTCCATCACCATCTGGCTCAAAGCTCTTAGTGATTCGAAATCCAGAGAATGAAGCTGCTTGTTGCTTTCAGATTTGGAGCTCTTCTCGAATGGAGAAGGAGTTCCACATTCCTCAATCACTGCATGGTACAGTATACAATGATGGATGGTTCGAGGGTGTCTCGTGGAACATGAATGAAACATGTGTAGCATACATAGCAGAAGGGCCCTCTCCTGCAAAGCTCACATTTAATGGTTTGGGGGGCTACAAGATAGATGGTTGTGCAGATAAGGATTCAGGTTATTGGAAATGTCAAGGGGACTGGGAGGAGGACTGGGGAGAAACATATGCTGGAAAGAGACAGCCGGCACTATTTGTTATTGACATCAACAGTGGAGAGGTGCAAGAAGTCAAAGGAATTGACAAATCCTTGAGTATTGGCCAAGTTGTATGGGCTCCATTTACTGAAGGCTCAGAACAATACCTTGTTTTCGTTGGGTGGTCATCCAAGCCAAGAAAGCTTGGCATTAAGTATTGCTCTAACAGACCTTGCGCATTATATGCTGTTAGACTTAGAGCACTGCATCATGAGTCAAAATCTAATGAACCAGTGCTCCAGTCAACTGAAGAATTTCATGTGATGAACCTTACTCAAACTATAAGCAGTGCATTCTTTCCACGGTTCAGTCCAGACGGAAAATTTCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCATAATGCTACAAATTCACTTCACAGAATTGATTGGCTAACTAATGGAAAACCTTTCCAATCTTCCAAAATTTACGACATAATTCCTGTTGTGATGTGTGCTGAAGACGGTTGCTTCCCTGGGCTTTATTGTACCACAATTCATAGTCATCCTTGGTTGTCTGACAACTGCACAATGATTATATCATCCATCTGGCACAGCAGTGAAGTTCTGCTCTCAGTGAATGTGTTGAGTGGGGAGATAGTACATATCAGCCCTGCAGATCCAAATTTCTCGTGGAATCTTCTTACGCTGGATGGGAACAATATTGTTGCCATTTCCAGCAGTCCGGTTGATTTTGCTCAAATAAGGTATGGAAAGGCCATTAAGAAGGAGACAAACAATACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATGCACTGACAAGGTTAGATCTTTGCTGTCCTCTCTCCAGTCTAGTATACTGAGGATCTCAGTCAAGGATGCTCATGATGGTCAAACAAAAGGTGCTACAAAACCTTTTGAAGCTATATTTGTGTCTTCTAAAACCAATAGCAAGATTGAATTTGATCCGTTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTTCTAAGTATTTGGCTTTTCTGTCTACAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTGGGATTTGGTGAGGAAGCTTTGCAATCTCTTCCAGGGAATGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGTCCATCTAAGATTACAGTAATGGGCATTTCACATGGTGGTTTTCTGACAACTCAGTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCGGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGATTGGAACAACAGATATCCCTGATTGGTGCTATGTAGAAGCTTGTGGAACCACTGCCAGACATTGCTTTACTGAACCACCTTCCGCAGATGATTTGACTCTCCTGTATAACAAGTCTCCCATTTCACACGTCTCGAAGGTAAAAGCACCAACACTATTCCTATTAGGTGCCCGAGATGTTCGTGTTCCAATTTATGATGGGTTGCAATATGCTCGGGCTTTGAAGGAGAAAGGTGTAGATGTCAAGATCATTATGTTTCAAAATGATGTTCATGCACTGAAAAGGCCACAATCTGACATGGAATCTTTCCTTAACATTGGGGTGTGGTTCAACAAGTACTGCAAATACGGGGCAAATGAATCACAAGATTTCCTCAAGACATAA 2391 0.4258 MPLFIHVLHYIISHLLWAKVLIPCLEMHKEAEDDYARLSSLLQEFTSIPNIDKAWLFSSPGLHLQGMFAVSQSDLLTNTRRTSIMSCNILKERDSSVKFLWAPFPIEMSGVSMIVPSPSGSKLLVIRNPENEAACCFQIWSSSRMEKEFHIPQSLHGTVYNDGWFEGVSWNMNETCVAYIAEGPSPAKLTFNGLGGYKIDGCADKDSGYWKCQGDWEEDWGETYAGKRQPALFVIDINSGEVQEVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSKPRKLGIKYCSNRPCALYAVRLRALHHESKSNEPVLQSTEEFHVMNLTQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWLTNGKPFQSSKIYDIIPVVMCAEDGCFPGLYCTTIHSHPWLSDNCTMIISSIWHSSEVLLSVNVLSGEIVHISPADPNFSWNLLTLDGNNIVAISSSPVDFAQIRYGKAIKKETNNTTWSWSNISSPIFRCTDKVRSLLSSLQSSILRISVKDAHDGQTKGATKPFEAIFVSSKTNSKIEFDPLIVILHGGPQDVSLSYFSKYLAFLSTVGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTQLIGQAPDKFVAAAAINPVCNLALMIGTTDIPDWCYVEACGTTARHCFTEPPSADDLTLLYNKSPISHVSKVKAPTLFLLGARDVRVPIYDGLQYARALKEKGVDVKIIMFQNDVHALKRPQSDMESFLNIGVWFNKYCKYGANESQDFLKT* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0013 796 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 30 784 - -
Vra8g0013 796 Pfam Prolyl oligopeptidase family 568 784 IPR001375 GO:0006508|GO:0008236
Vra8g0013 796 SUPERFAMILY alpha/beta-Hydrolases 551 784 IPR029058 -
Vra8g0013 796 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 32 300 IPR045550 -
Vra8g0013 796 ProSitePatterns Prolyl endopeptidase family serine active site. 612 642 IPR002471 GO:0004252|GO:0006508
Vra8g0013 796 Gene3D alpha/beta hydrolase 532 783 IPR029058 -
Vra8g0013 796 SUPERFAMILY DPP6 N-terminal domain-like 108 469 - -
Vra8g0013 796 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 30 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0013 Vra-Chr8 188856 197808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0013 548 767 Carbohydrate Esterase AT5G36210 25.000 1.03e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0013 K01303 - gmx:100812681 1366.29