Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g0005 | ATGGATTCATTTTTTCCCGAGAAACTTCTGGGTGAGATCTTCTGGGATCAACCGCTTTTGCCCACTGATCAAAATGATGTAGTTCAAAATTCCCAAATCATCAAGGCTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTGTTCAATATAGAGACCTACCCAGAAGAAATAACCCTCTAAACGGGTCAAATTCAGAGAGCATGAGTAAGAGGATGCTTGCGTTCTTGAGAAAAAGTTCCCCCGTGGAGAGAAATAACGTAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAACGAGAGAATGAGAAGACAGAGACAGAGACAATGTTGCTTGGCCCTGCATTCAATTTTACCACACGGAACCAAAACGGATAATAATTCTGTAATTCAAACAGCAGCAAAGGAGATTGTAAGGCTACAAGGATGCAGAGAAGAGTTGCAGAGGAAAAATTGCGAGGCTGAAGGTGTTTGTGTGAGGAAGAAAGACGGAGGAAGCAAGATTGCATATTTGAGAGTTGCTGATCCCGAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGGAAGGAGTGGAGAGCAGGAGGATCAAATCAAGTTTCTCCCCAAAGGAGTTGTTTGCAGTGTTAGAGATAGAGAGTGGTGAGGAGGTATAA | 672 | 0.4315 | MDSFFPEKLLGEIFWDQPLLPTDQNDVVQNSQIIKAEAFPPATQSAFVQYRDLPRRNNPLNGSNSESMSKRMLAFLRKSSPVERNNVEENERDRSFRHMINERMRRQRQRQCCLALHSILPHGTKTDNNSVIQTAAKEIVRLQGCREELQRKNCEAEGVCVRKKDGGSKIAYLRVADPECGIDSMVERLKWLKEEGVESRRIKSSFSPKELFAVLEIESGEEV* | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g0005 | 223 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 93 | 142 | IPR011598 | GO:0046983 | |
Vra8g0005 | 223 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 90 | 156 | IPR036638 | GO:0046983 | |
Vra8g0005 | 223 | Gene3D | - | 83 | 157 | IPR036638 | GO:0046983 | |
Vra8g0005 | 223 | PANTHER | TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED | 1 | 219 | IPR044658 | - | |
Vra8g0005 | 223 | Coils | Coil | 132 | 152 | - | - | |
Vra8g0005 | 223 | PANTHER | TRANSCRIPTION FACTOR BHLH92 | 1 | 219 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g0005 | 44 | 219 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G43650 | 38.462 | 2.48e-31 | 112 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g0005 | - | - | pvu:PHAVU_007G280700g | 374.785 |