Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3613 ATGGAAAATGCAAAGAAATTTTACACAAATTACGCCACTACATCTGAATTTGCTTTGAGGACAAGAAGTTCAAGAAAAGATAAGGACAACAATGTGTGCTACTTGCGATTAGTTTGTTCAAGGGAGGGCAAATATGTATCTTCCATCAAACCTGATGTGAAAACGCTTCCATGTCAAACAAATGAATGTCCAGCTGGCATTAGCATTGCAAGGAAGGACAATAAATGGTTTATAAAGAGCGTTGCACTAGATCACAACCATGACCTATGCATGAATACGTCTAAGCTTATTCCTGGGAATAGAAAATTGAGCATGCAAGCCAAACACACGTTGGAGGTCAATGACGATGCGGGAGTTCGGATAAATAAGAGCTTCCTTAGCATCGTTAACGATGCAGGTGGATTTGAGAATATGGAATTCGTTGAACAAGATGCACGAAACTATATTGCGCAACACAGAAGATCTTTATGTAAGGACGGTGATGGGCAAGCACTGTTATGA 501 0.3992 MENAKKFYTNYATTSEFALRTRSSRKDKDNNVCYLRLVCSREGKYVSSIKPDVKTLPCQTNECPAGISIARKDNKWFIKSVALDHNHDLCMNTSKLIPGNRKLSMQAKHTLEVNDDAGVRINKSFLSIVNDAGGFENMEFVEQDARNYIAQHRRSLCKDGDGQALL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3613 166 Pfam FAR1 DNA-binding domain 6 90 IPR004330 -
Vra7g3613 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 101 - -
Vra7g3613 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3613 Vra-Chr7 55548668 55549168 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra7g3613 FAR1 7.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3613 - - vra:106753602 279.641