Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3608 ATGGATGGTGAAAGCATTGACGAATTTAATACCGTAGATCAAAGTTTTTCAGATATCGTCCCAACTTTGAACATGTGTTTTGACACTATGGAAGAAGCAAGGAAATTTTATTGTGATTATGGAAAAAGATGTGGTTTTGGTGTTCGAACAAGAACTTCAAAGAAGGACAACAATAACCAAGTGTATTACTTGAGATTAGTATGTTCAAGGGAAGGTAGATATGTTTCTAACATTCGTCCTGAAGTAAAAACTCTACCTAGTCAAACTAAACAATGCCATGCTGGAATCACATTTGCTCGAAAAGATGACAAATGGGTTGTTAGGACTGTTATTGTAGAGCACAGTCATGAGCTGTGTCCACAAACCTCCAATCTCATTTGTGGCAATAAAAAATTGAACATGCAAGCGAAACACACGTTGGAAGTTAACGATGACGCTTTGGTGTACGTATAA 453 0.3687 MDGESIDEFNTVDQSFSDIVPTLNMCFDTMEEARKFYCDYGKRCGFGVRTRTSKKDNNNQVYYLRLVCSREGRYVSNIRPEVKTLPSQTKQCHAGITFARKDDKWVVRTVIVEHSHELCPQTSNLICGNKKLNMQAKHTLEVNDDALVYV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3608 150 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 122 - -
Vra7g3608 150 Pfam FAR1 DNA-binding domain 35 119 IPR004330 -
Vra7g3608 150 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3608 Vra-Chr7 55479299 55479751 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra7g3608 FAR1 9.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3608 - - vra:106766675 315.464