Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3607 ATGCAAGGAGAATTGGAATTACCACCTGGGTTTAGATTCCACCCCACCGACGATGAACTCGTGAATCACTACTTGTGTAGAAAGTGTGCTGCTCAGTCCATTGCCGCTCCCATCATCAAAGAAATCGATTTGTATAAGTTTGATCCATGGCAGCTTCCAGACATGGCTCTTTACGGTGAGAAAGAGTGGTACTTTTTCTCCCCTCGTGACCGAAAATATCCAAACGGTTCACGACCGAACCGGGCTGCTGGAACCGGGTACTGGAAGGCCACCGGAGCCGATAAACCGATTGGAAAACCGGAAGCCCGTGGAATTAAGAAAGCCCTTGTGTTCTACGCGGGGAAAGCTCCGAAAGGGGTTAAGACAAATTGGATCATGCACGAATATCGCTTAGCCAACGTCGATAGATCTGCCTCCAAGAAAAACAACAATTTGAGGCTTGATGATTGGGTGCTATGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAATAATGTCGACGGGGTGGTGGAACAGAAACCGGCGAAATTACCGGAGGAGGTTCTGTTCCAACACGAGATGAAGCCTGAGATCCAGATGTACGGCCACGATCATTTCAGGAACAACCAATTGTACATGGACACGTCGGATTCCGTGCCGAGGTTAAACACGGACTCTAGCTGCTCCGAGCACGTGGTTTCACCGGACGGCACCTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAACGACCTGGAGTTGGGCCCGGACCTGGTTTCGGGCTACGATTTTAATTTCATGGAGCTGTCAGCAGATGACGCTTTTGCCCCTCAGGCCCAGTTCCAAATGAACCAGCCCTCGACGTGGCAAGATATGTTCGCGTACCTTCCGAAGACATTTTAA 888 0.5011 MQGELELPPGFRFHPTDDELVNHYLCRKCAAQSIAAPIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPEARGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNNVDGVVEQKPAKLPEEVLFQHEMKPEIQMYGHDHFRNNQLYMDTSDSVPRLNTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDLVSGYDFNFMELSADDAFAPQAQFQMNQPSTWQDMFAYLPKTF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3607 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Vra7g3607 295 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 268 - -
Vra7g3607 295 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Vra7g3607 295 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Vra7g3607 295 PANTHER NAC TRANSCRIPTION FACTOR 56 5 268 - -
Vra7g3607 295 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3607 Vra-Chr7 55473741 55475298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3607 1 295 NAC Transcription Factor Family AT1G01720 61.538 6.46e-122 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g3607 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3607 - - gmx:100170751 537.724