Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3605 ATGCATGCTGCATGGAACGATTTTAAAATTTTAGTTTTAGACATCACTACCAAAGATTTATCTGCTTCTTGTCCTACCATGACAAGCCTCTGCCTTGGGCCGTTCCTTGCTGTTAGTGACCCAGTTAGTTCAAGAGCCTTTGGAGGCCATATAACCAGAAAGTGCTTCCCCAAGCAAGTTCATTTCCACTCCCGTTCTGTTGTTTTCTCTTCAATCTTATGTTCTGCAACTCTATCAGTATTGCCAGAATTAGAAGAGAAGCAGATATTTGATGGAGAGAAGGCTAATTTGCTTGTTAGAGATCTCAGAAAGGGCTTTGATTCAGGCAGGACAAAGAGTTATGAATGGAGGGTTTCCCAGTTGGAGGCCATTATTAAGATGTTAAAAGAGAGAGAGAAGGAAATTACTGAAGCTCTATATAAGGATCTTGCTAAACCTCAACTTGAAGCATTTATATCTGAGGTTTCCCAGGCAAAATCCTCATGCAGTGAAGCACTTAAGGAGCTGAAACAATGGATGAAGCCTGAGAGGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTTTGCCAGAACCGCTGGGGGTTGTGTTGGTTATCTCAACATGGAACTTTCCTTTCTTGTTATCAATGGATCCGGTTATTGGAGCCATTTCTGCGGGTAATGCAGTGGTCCTTAAACCATCAGAAGTTGCTCCAGCAACATCATCACTTCTTGCAAATTTGGTTGAGCAATATTTAGACAACTCTGCCATCAGAGTTGTTGAAGGAGCTGTTCCTGAAACAACTGCACTCCTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCTAGAGTGGGTCGGATTGTCCTGGCAGCAGCTGCAAAGCATCTTACACCAGTGATTCTGGAACTTGGAGGAAAGTGCCCTGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGCAAGTGGGCATGCAACAGTGGGCAAGCATGCATTGCTGTTGATTATGTCATCACAAGAAAAGAGTTTGCTCCAAAGCTGATAAGCGCCTTAAAAGATGAATTGGAAGAATTTTTTGGTAAAGATCCATTGGAATCAAAAGACATGTCACGGATTGTGTCTTCTAACCAGTTTGCACGGCTTGTGAAACTCTTGGATGAGGATAAGGTATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTTCCCCAACTATCATATTAGGTGTTCCTGAAGATGCTTTGGTAATGCAGGAGGAGATATTTGGGCCAATATTGCCAATCATCACAGTAGACAACATAGAAGATTGCTACAGTATAATCAAATCAAGGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCGTCGGGAGGGATACTCATCAATGACGCCGTCATCCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGTCATAGGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGGTACCCCCCATACACACCTCAGAAGGAAAAATTATTGAAGGCCATTATCAGTGGCAATATTGTTCAAATAATTCTTGCTCTTTTTGGATGGTCTTAA 1704 0.4143 MHAAWNDFKILVLDITTKDLSASCPTMTSLCLGPFLAVSDPVSSRAFGGHITRKCFPKQVHFHSRSVVFSSILCSATLSVLPELEEKQIFDGEKANLLVRDLRKGFDSGRTKSYEWRVSQLEAIIKMLKEREKEITEALYKDLAKPQLEAFISEVSQAKSSCSEALKELKQWMKPERVSTSITTFPSSAEILPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEVAPATSSLLANLVEQYLDNSAIRVVEGAVPETTALLEQKWDKILYTGSARVGRIVLAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACIAVDYVITRKEFAPKLISALKDELEEFFGKDPLESKDMSRIVSSNQFARLVKLLDEDKVSDKIVLGGQRDEKKLKISPTIILGVPEDALVMQEEIFGPILPIITVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGILINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTPQKEKLLKAIISGNIVQIILALFGWS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3605 567 Pfam Aldehyde dehydrogenase family 93 524 IPR015590 GO:0016491
Vra7g3605 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 103 522 IPR016162 GO:0016491
Vra7g3605 567 SUPERFAMILY ALDH-like 98 540 IPR016161 GO:0016491
Vra7g3605 567 Coils Coil 118 138 - -
Vra7g3605 567 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Vra7g3605 567 PANTHER ALDEHYDE DEHYDROGENASE 68 567 IPR012394 GO:0006081
Vra7g3605 567 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 68 567 - -
Vra7g3605 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 504 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3605 Vra-Chr7 55462824 55467367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3605 42 567 Aldehyde Dehydrogenase Gene Family AT4G34240 65.209 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3605 K00128 - gmx:100800699 972.23