Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3594 ATGGGTTTCCTCTCTGAACAAGAAATAAAGAAGATGAAGGTGAAGAAAGGTTGGCTGGCAGTTGAGGTAGAAGAAGAATCAGAAGAGGGTTGTGGCGAAGGCTCTCACAGGTTTATGATTCCAATTTCGTATCTTTATCATCCTCTCTTCAAGAACCTTCTGGATAAAGCCTACGAGGTTTATGGCTACCACACCCAAGGTCCTCTCAAGCTTCCATGTTCAGTTGATGATTTTCTTCATCTCCGATGGAGAATCCACAAAGAAGCCACCACCCACCATCGCCATAACCATCTTCATCACCAACCTCATCGTCAACTTTCTAACTCCTTCTCTTTCCACTCTTGTTGA 348 0.4397 MGFLSEQEIKKMKVKKGWLAVEVEEESEEGCGEGSHRFMIPISYLYHPLFKNLLDKAYEVYGYHTQGPLKLPCSVDDFLHLRWRIHKEATTHHRHNHLHHQPHRQLSNSFSFHSC* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3594 115 PANTHER SMALL AUXIN-UP RNA-RELATED 12 102 - -
Vra7g3594 115 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
Vra7g3594 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3594 Vra-Chr7 55361285 55362032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3594 14 106 Calmodulin-binding Proteins AT5G20810 38.710 5.24e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3594 K14488 - gmx:100306557 155.992