Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g3594 | ATGGGTTTCCTCTCTGAACAAGAAATAAAGAAGATGAAGGTGAAGAAAGGTTGGCTGGCAGTTGAGGTAGAAGAAGAATCAGAAGAGGGTTGTGGCGAAGGCTCTCACAGGTTTATGATTCCAATTTCGTATCTTTATCATCCTCTCTTCAAGAACCTTCTGGATAAAGCCTACGAGGTTTATGGCTACCACACCCAAGGTCCTCTCAAGCTTCCATGTTCAGTTGATGATTTTCTTCATCTCCGATGGAGAATCCACAAAGAAGCCACCACCCACCATCGCCATAACCATCTTCATCACCAACCTCATCGTCAACTTTCTAACTCCTTCTCTTTCCACTCTTGTTGA | 348 | 0.4397 | MGFLSEQEIKKMKVKKGWLAVEVEEESEEGCGEGSHRFMIPISYLYHPLFKNLLDKAYEVYGYHTQGPLKLPCSVDDFLHLRWRIHKEATTHHRHNHLHHQPHRQLSNSFSFHSC* | 116 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g3594 | 115 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 12 | 102 | - | - | |
Vra7g3594 | 115 | Pfam | Auxin responsive protein | 12 | 84 | IPR003676 | GO:0009733 | |
Vra7g3594 | 115 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 12 | 102 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g3594 | Vra-Chr7 | 55361285 | 55362032 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g3594 | 14 | 106 | Calmodulin-binding Proteins | AT5G20810 | 38.710 | 5.24e-12 | 57.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g3594 | K14488 | - | gmx:100306557 | 155.992 |