Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3584 ATGGCCTTAGCCATGGTTCGTAGGAATGTCATCACCCACTACTCCAAGTTTACATCTTCTTGGTCTGTGTTGTCTCGTCATTCCTCAATCCACAACCCTTCCTCGGCGTCTGTTTCTCCGTTTCATAGCCAATCTGTTGGTGGTGGTGGTGGTGGTGGAGGATTGCCATCTTACATGCGTGGAGCTGTGTATTGGGAGACTAATAAGCCTCTTTCAATCGAGGAATTTCACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAGGCCTGTGGGGTATGCCACTCTGATCTGCATGTTATAAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTCTGGGGCATGAGATTACCGGTGAGGTTGTTGAACATGGACCACACTCGGACAGCAAGACAATTGAAAGGCTTCCAGTAGGGTCCCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCACGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTAGACTATTTCTTCGAAACAGTGGAAAACCAGTATACATGTACAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCCGCAAATGGAGTGGCTGTACTACCAGAGTCATTGCCATATCCACAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCCATGGCTCACGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTCTGCAGATAGCTAGAGCCTTTGGTGCTTCAGAAATAATTGCTGTGGATGTTCTGGATGAAAAGTTACAGAAAGCAAAGACATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATAAATGAAATTACTGGTGGAAAGGGTGTTGATGTAGCTGTGGAAGCCTTGGGGAAACCACAAACATTTGCTCAGTGCACACTAAGTGTGAAGGATGGTGGAAAAGCCGTAATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGTAGAAAGATACAAGTTATTGGGTCGTATGGAGGGAGGGCGAGGCAAGATCTTCCAAAACTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGACCATGCTGTTTCTAGAACATACACCTTTGAGGATGCAGCCAAAGCATTCCAAGATCTTAATGAAGGAAAAATCATTGGCCGAGCTGTGATCGAGATAATGTAA 1293 0.4578 MALAMVRRNVITHYSKFTSSWSVLSRHSSIHNPSSASVSPFHSQSVGGGGGGGGLPSYMRGAVYWETNKPLSIEEFHMPRPKAGEVLIKTKACGVCHSDLHVIKGEIPFSSPCVLGHEITGEVVEHGPHSDSKTIERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVYMYSMGGLAEYCVVPANGVAVLPESLPYPQSAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASEIIAVDVLDEKLQKAKTFGATHTVNSAKEDPIEKINEITGGKGVDVAVEALGKPQTFAQCTLSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLDHAVSRTYTFEDAAKAFQDLNEGKIIGRAVIEIM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3584 430 Pfam Zinc-binding dehydrogenase 259 390 IPR013149 -
Vra7g3584 430 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 429 - -
Vra7g3584 430 Gene3D - 63 419 - -
Vra7g3584 430 SUPERFAMILY GroES-like 57 255 IPR011032 -
Vra7g3584 430 SMART PKS_ER_names_mod 66 427 IPR020843 GO:0016491
Vra7g3584 430 Pfam Alcohol dehydrogenase GroES-like domain 84 214 IPR013154 -
Vra7g3584 430 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 221 394 IPR036291 -
Vra7g3584 430 CDD Zn_ADH10 59 428 - -
Vra7g3584 430 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 116 130 IPR002328 GO:0008270|GO:0016491
Vra7g3584 430 Gene3D - 236 373 - -
Vra7g3584 430 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3584 Vra-Chr7 55257161 55260831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3584 76 380 Monolignol Biosynthesis Gene Families AT4G37990 27.564 1.72e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3584 - - gmx:100775182 777.319