Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3531 ATGGCAGCGACAACTACAACAACTTTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACGCAAGTATCGAGAAACGACAATCTCAGCTGCCGCTTCTCCAAACCACACCCAAACAATTCCTCATCGTCGCACTCCACAATCCCCTATATGTTCCCAAACCCCATCCAACCCTCAACCACCTGCATTGCCCCAATCACCCTCCTCCACCCACACCATCCCATTCTCCCCGATAATGGACTTCACCCACTCCTCCCCCACCGCCAACGGCCACCACCCCTCCCACCCACAGTCCCACGACTTTCCCTCCAGCTTCTCCAAGTTTAACTCCGCCCTCACCGCCGGCCTTTTGAACCCAATGTCCCCCCCGCCAGACAAGACCCGATCCAGCCCCACGCTCTTCGAAATGATGGCCAGCGAGCCCGATGTCCACCACAGGCCCACCACCCACATCCCCCCCACCACCGTCTCCGCCGCCGCTGCTGCGTCGTCGCTGCACAAACCCCAGATTCTCGATCGCCACGCCCTCATGATGCAGCGGATTTCGGACCTCTTGGGGTCCCGCAGCCCCGGGAACCAGTTCAACGATGCCGCTTCCAGTGATATCAAGCTCACGCTCAGCTCCAAAGACGGAATCAGTGTCTCCATGAACGTGCATCGTCAAATCCTCGTCGCGCACAGTAGGTTCTTCTCGGTGAAGCTCTCCGATCGCTGGACCAAGCAGCAGCAGCAGCGCTCGCCGGTTCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTGGAGGTTTACATCGAGACCTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCAGAGTTCTCGGTATCTTAAAGGTTTCAGCTGCCATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACCTGGAAGCGGCACCTTGGGCCGAGGATGAGGAAGAGAAGGTGGCATCGCTCCTTTCCGAGCTTCGTCTTGAAGCGGTTGGCGCAGGGGAGGTTTTGAAGAGGGTTTCAACTGATGCTGCTGCCAATGGAAATGAAGAGGGGAGTGATAATGAGGAGGTTCTTCTTAAGCTTATTCGTGTGGTTCTCGAAGGCAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTAGTGTCGAAGATGCTGCATGAAAATTCTTCTCAGAATGATCTTCGGAAGGAGTCGCTGTACTTAGCATGTGGTGATTGTCTGCAGTTACTTCGTGACCACTTTTTGCAGGCTGCGGGTTCGCATTTGCAGGATGTGAGTCAAATTGCAAGACAAGCAGACAATTTGCATTGGATTTTGGATATTTTAGTTGATAGACAGATTGCTGAGGATTTCCTGAAAACATGGGCCTCTCAAGCAGATTTGGCTGAAGCTCATTCTAAGGTGCCAGCAGTTCACAGGTTTGAGGTTAGCCGAGTTACAGCAAGGTTGTTTGTTGGGATTGGCAAAGGACAGTTGTTGGCTTCTAAAGATGTCAGGTGTTTGCTTCTAAAAACATGGTTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCCAAGGGGCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACTATTCTTACTCTGCCGCTCTCTTGGCAACAGGATATTTTGCTTGCTTGGTTTGATCGTTTCTTGAATTCCGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGAAATGGAGAGCAAGAACGGACAAGACAATTACGAATTACAACTACATCGGTTGAGAACCCTTGA 1824 0.5137 MAATTTTTFLKLQNQPTKPKRRKYRETTISAAASPNHTQTIPHRRTPQSPICSQTPSNPQPPALPQSPSSTHTIPFSPIMDFTHSSPTANGHHPSHPQSHDFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDVHHRPTTHIPPTTVSAAAAASSLHKPQILDRHALMMQRISDLLGSRSPGNQFNDAASSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWTKQQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDAAANGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENSSQNDLRKESLYLACGDCLQLLRDHFLQAAGSHLQDVSQIARQADNLHWILDILVDRQIAEDFLKTWASQADLAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSVENP* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3531 607 MobiDBLite consensus disorder prediction 29 53 - -
Vra7g3531 607 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 16 605 IPR038920 -
Vra7g3531 607 PANTHER OSJNBA0011J08.25 PROTEIN 16 605 - -
Vra7g3531 607 MobiDBLite consensus disorder prediction 1 15 - -
Vra7g3531 607 MobiDBLite consensus disorder prediction 1 106 - -
Vra7g3531 607 Pfam BTB/POZ domain 194 289 IPR000210 GO:0005515
Vra7g3531 607 MobiDBLite consensus disorder prediction 69 106 - -
Vra7g3531 607 Gene3D Potassium Channel Kv1.1; Chain A 182 314 IPR011333 -
Vra7g3531 607 ProSiteProfiles BTB domain profile. 201 280 IPR000210 GO:0005515
Vra7g3531 607 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3531 Vra-Chr7 54612796 54615891 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vra7g3531 BTB 0.00025 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3531 - - ccaj:109800730 1021.15