Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3518 ATGGAGGCATCAACGGCTTTAATGTTCCTATCTGCAATAGCGGCCTATTTAATATGGTTCACCTTCGTAACTCGCTCCCTCAAAGGTCCACGTGTCTGGCCCCTATTAGGCAGCCTCCCCGGTCTCATCCAACATGCCAACCGCATGCATGACTGGATCGCTGACAACCTACGCGCCTGCGGCGGCACCTACCAAACCTGCATCTGCGCCCTCCCCTTCCTCGCACGCAAACAGTGCCTCGTCACTGTCACCTGCGACCCCAAGAATCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTACCCCAAGGGCCCCACCTGGCAGTCAGCCTTCCATGATTTGCTCGGTCAGGGCATCTTCAACTCCGACGGCGACACCTGGCTCTTTCAGCGCAAAACAGCGGCGCTCGAATTCACCACGCGCACCCTGCGCCAGGCCATGGCGCGTTGGGTCAACCGAGCCATTAAGCACAGGTTCTGTCCCATCCTCGCCGCGGCTCAGCAAGACAACAAATCGGTGGATCTCCAAGACCTCTTGCTTCGCCTCACTTTCGACAACATATGCGGCTTGGCTTTCGGGCAGGACCCTCAGACTCTGGCCGCTGGCCTCCCTGACAATGCTTTCTCTATTTCCTTTGACAGCGCCACCGAAGCCACTCTACAACGCTTCATTCTCCCGGAGATTCTTTGGAAGCTCAAGCGATGGCTCCGCCTCGGCATGGAAGTCAGCCTTAGCCGAAGCCTCAAACACATCGACCAATACCTCTCCAGCATCATCAAGAACCGTAAACTCGAACTCGTCAACGGCACTGGCTCCCACCACGACGACCTCTTGTCTCGTTTCATGAGGAAAAAGGAAACCTACTCGGACGAGTTCCTCCAGCACGTGGCACTCAACTTCATCCTGGCCGGACGCGATACGTCATCGGTCGCCCTCAGCTGGTTCTTCTGGCTCTGTATCAAGAACCCGCACGTGGAGGAAAACATCCTTCGAGAACTCTGCACTGTTCTGCTCTCCACTCGTGGAGAAGACATCTCAACCTGGCTGGAAGAACCTCTCGTGTTCGACGAGGTAGACCGTCTCGTCTATCTCAAAGCTGCCTTGTCCGAGACCCTGCGACTTTACCCTTCCGTCCCTGAAGACTCCAAACATGTCGTTGAGGACGATGTTCTCCCCAACGGGACTTTCGTTCCGGCGGGGTCCTCCGTGACGTATTCGATTTACTCCGTTGGGAGGATGAAGTTCGTATGGGGAGAGGATTGCCTCGAGTTCAAGCCAGAGCGGTGGCTCTCTCCCGAAGGGGACAGAATTCAGGTTCAAGACTCTTATAAGTTTGTTTCCTTCAATGCGGGACCGAGGCTTTGTTTGGGGAAGGACCTGGCTTACTTGCAGATGAAGTCCATCGCGGCGGCGGTGCTACTGCGCCACCGCCTCGCAGTCGCGGCGGGCCATCGCGTGGAGCAGAAGATGTCGCTCACGCTCTTCATGAAATACGGTCTGAAGGTGAACGTGTGCCCTAGGGATCTGAAACCGGTGCTGGAAAAGATAAAAAAGACCGAGGGTGTCGATGTCGGTCAAAAGTGA 1584 0.5593 MEASTALMFLSAIAAYLIWFTFVTRSLKGPRVWPLLGSLPGLIQHANRMHDWIADNLRACGGTYQTCICALPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQQDNKSVDLQDLLLRLTFDNICGLAFGQDPQTLAAGLPDNAFSISFDSATEATLQRFILPEILWKLKRWLRLGMEVSLSRSLKHIDQYLSSIIKNRKLELVNGTGSHHDDLLSRFMRKKETYSDEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPHVEENILRELCTVLLSTRGEDISTWLEEPLVFDEVDRLVYLKAALSETLRLYPSVPEDSKHVVEDDVLPNGTFVPAGSSVTYSIYSVGRMKFVWGEDCLEFKPERWLSPEGDRIQVQDSYKFVSFNAGPRLCLGKDLAYLQMKSIAAAVLLRHRLAVAAGHRVEQKMSLTLFMKYGLKVNVCPRDLKPVLEKIKKTEGVDVGQK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3518 527 Pfam Cytochrome P450 28 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vra7g3518 527 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3518 527 PANTHER CYTOCHROME P450 3 509 - -
Vra7g3518 527 PANTHER CYTOCHROME P450 86A7 3 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3518 Vra-Chr7 54466094 54468316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3518 1 518 Cytochrome P450 AT2G45970 75.048 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3518 K15398 - gmx:121174913 999.964