Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3513 ATGGCGAAAAGATCTCCTACTCGGGTTAACCAAACGTACGAGACAGGCTGTACGTGGCGAATGTTTAGAATCTTTAATTTTCGTGAAAGTCGTTCCGACAGAAGATTGGTTTCCAGTAGGAGGCATTTGAATGCTCATGCTAATGAAAATGGAAAATCCAGAAGTAACTCAGGTGAGGCCAGCACAGTTGATGAGAAGTGCCTTCAAATTGGTGTTAGTTCCAGAAGAAGAGATTACATCTGTAGAAGTATCAACAGCATGGTGAATGATGAGGTAGCAGATTGGGAAAATGAAGTAAAAAAGATGATCGTTGATCACAGGTTTGTCAATACACATTATCAAGGCAAAGATGGAGCGGGCTGCCAGCCTAATCAATTCCTGGATGCTTTACAGATTTTATATACAAACAAGGAACTTTTCATTAAACTTCTGCAAGATCCAAATTCTTTGTTAGTAAAACAGATTCAGGAATTACAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGACGAGTAGATTAAATAAGCCTCAAAATACTGATGCTACACAATGTGCAAAACCTTTTAATTCCTCTGATAGATCTGATTTGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACAGTTAATGTGGAAAATTCTGTAGAAACAAGCTTTGTAAGTCCTCCACATTCGCCTGATAGCTTCAGTTCTAATGCACAAAATACTAGGCTTTCACATTTTCCCTTCAGTTGTATAAAGAGAACATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAGCAGTTGAAGACAGCTGATGGAATACCAAGTAGACTTTCCTCCAGTTCAAAGGGCCTGGGAGATGGAAAAAAAGCACAAGAATTGGAAATTTCTGAAAGAAACTCACCAATTCATGCCCTTAGTAATACTGGAAAATGGTTGAATTCATATCATGATTTGAAGAAGAAGAGGGAGAACATTATCATGTTCAAGGATTCTGCGTTATGTATGGGTCAGGAAGCAGCTTCTTTTGGTGAAAGTTGCAGTAAGAATACTTCAGTTAGCCCTCGTGAAGAAAATATATTGAAAATGCACGTTGAAAGTAGGAAGAGTCGATCTCAGATGTTGAACTATGGAATCGAGGAAACTTTTGAAGAAGACATTAATCTTAAAAATAGTGTTCTTAACCACAATCTGCATGCATATTATGATATTCCTAGAGATGGCAGATACATGGACAGTCCTACTCAGAACATCAACATGAATAATATAATCGGAGGAAGTGGATCTTTGCTGGATTTGCGTCCAGAAATCCAGACATTGTCTTTTTCATCAGATGTTTCATCAAGCCAATCCTGTCAGAGAACAGATAATACTGTAAACATGGGAAACAAAGTCGAACATCCTAATAATGAATCTTTTGATGAACATTTTATTAAGGATGATGTTACCAACCTTATTCAACCAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACCATTTTGAAGACCTTTTAAGACTCTCTTTTGATCCAATGAACGATTTAGTCTCCTCCAAGGACGACATCATAGACTATGTAAGGGAAATTCTGCATGCTTTGAACCTTACTCTGAAGAGATCATCTGACCAATTGCTGGATCCAACCACCTTTGTTGAACTGAAGGAAAAACCTAGCCAACTTTCTGGTGGAACAATCTTGCATGACTGTGTCATAGAATGTTTCATGCAGGTATACCAGAATAGTGGTTTCCCACTTCACGTTGGAAACGTCCAAGCGTATGTTTTGAAGAAACTTGTGGTTAAAGAGATCACTGAACTCGTTAACTTGCACTTTCACTCTCATCCATCAACTTTAACGTTAGAACAGCTTGTTGAAATGGACTTGGCAAGACGTGGTTCATGGCTAAATATCCAAGTTGATGCAGAAGATATAGCAGTAGAGCTGGAGACACATGTTCTTGAAAAACTGGTATTGGAAATTGCCTCTGAGATGAATTACCAGAAACATGACACATTGCAATAA 2034 0.3825 MAKRSPTRVNQTYETGCTWRMFRIFNFRESRSDRRLVSSRRHLNAHANENGKSRSNSGEASTVDEKCLQIGVSSRRRDYICRSINSMVNDEVADWENEVKKMIVDHRFVNTHYQGKDGAGCQPNQFLDALQILYTNKELFIKLLQDPNSLLVKQIQELQSSQVKEPCQHARQKMTSRLNKPQNTDATQCAKPFNSSDRSDLRSNRIVVLKPGTVNVENSVETSFVSPPHSPDSFSSNAQNTRLSHFPFSCIKRTLKHVMKVRRQEQQLKTADGIPSRLSSSSKGLGDGKKAQELEISERNSPIHALSNTGKWLNSYHDLKKKRENIIMFKDSALCMGQEAASFGESCSKNTSVSPREENILKMHVESRKSRSQMLNYGIEETFEEDINLKNSVLNHNLHAYYDIPRDGRYMDSPTQNINMNNIIGGSGSLLDLRPEIQTLSFSSDVSSSQSCQRTDNTVNMGNKVEHPNNESFDEHFIKDDVTNLIQPDESPEKRMHEKIEENHFEDLLRLSFDPMNDLVSSKDDIIDYVREILHALNLTLKRSSDQLLDPTTFVELKEKPSQLSGGTILHDCVIECFMQVYQNSGFPLHVGNVQAYVLKKLVVKEITELVNLHFHSHPSTLTLEQLVEMDLARRGSWLNIQVDAEDIAVELETHVLEKLVLEIASEMNYQKHDTLQ* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3513 677 MobiDBLite consensus disorder prediction 266 290 - -
Vra7g3513 677 Pfam Protein of unknown function (DUF3741) 106 149 IPR022212 -
Vra7g3513 677 MobiDBLite consensus disorder prediction 269 286 - -
Vra7g3513 677 PANTHER DUF3741 FAMILY PROTEIN 4 95 - -
Vra7g3513 677 PANTHER DUF3741 FAMILY PROTEIN 384 668 - -
Vra7g3513 677 PANTHER DUF3741 FAMILY PROTEIN 96 377 - -
Vra7g3513 677 Pfam Domain of unknown function (DUF4378) 528 663 IPR025486 -
Vra7g3513 677 MobiDBLite consensus disorder prediction 175 197 - -
Vra7g3513 677 MobiDBLite consensus disorder prediction 40 60 - -
Vra7g3513 677 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 384 668 - -
Vra7g3513 677 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 95 - -
Vra7g3513 677 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 96 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3513 Vra-Chr7 54416729 54421280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3513 517 651 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 30.769 2.11e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3513 - - vra:106768413 1311.59