Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3508 ATGTCTGAAAGCAATAAATCACCCAAAAATGATCATCAGTCCATAAAATATTGGTGGATTCAACAGGGAGGAGCGTCCTCTCAGACGGATCTTTCGGGGGTAGATTATTCGCCTTCTCTTTCCAACAAGGAGAATAAGCAACAGTATGGAAGTTGTCAACCTACGTCCCCTCAGATACGGAGCACAGCTCAGCTCATCTCTGCAATAGGTCAGGTATGCGATTCTGCAAGTCAATCGCTTTCGGTTTTACTCCCAAAGGAAAATTTGAATCAGGATGATGACAGATTCTCAAAAGAGAAATTTCTGGATAACATTGGAGAGAGAAAGAATAACCTGGTGTATACTTCGAATGGCACTAAATTCTATCCTCTTACTGCGGGTGCTGCAAAGATTGTGCGGGAAAGATTGGATTTTCCTAAGGTAATGCAGAAGATATTAGTGTCTGAATCTCCTAATGAAAGTCAAGATTATATCCATTCTTTATTCCAGAGGTTTTCAAAGGCTAGTGATAAAATAACAAATAAAGACTGTAAGAGAATGGAACTTGCGAGGGAGGAAATGTCATTTAAATCTGGAAATGTATATCGGTGGGCATGTAGAAATGCTGTCCGGATGCTAAATTGTCAAATGAATATTACCCAGCCTGAGAACCTGGAAACTAATTCATCAGTTTCTGGCGGTGGCATTTCCTTACATACAAGCACCCCTGCATTGGCAAACGAGGAGAGGGATGTTTGCAATTCAATCACACACCAAAGTAAATCATTGACCAATGCTGCAATTCCGAACACAAGAATAGTTAGCCCACTGAGTTCAGACTATTTTCTGCAAGCTGTACCCCATGCTAAGGCAGAAGTTGGTGATTATCAGAAACTTTCTTCTAGTATCTATGCGGACTGTCACAGTAACAGTTTAGCTTCATGTACTTGTGCTTCTGAGCAGTGCCAACATGGCATTGATGAAAATGAATCACTGGAAGTCCAAGGAAGGCATTTGTTGGATATAACTAATGATGAACCTAAGCTTCAGACTTTCTCTGCAACCCATCCGAAGCCTTGTAATTCCCAAGCCAAGCCAGAACATGCTTTTTCTGGGGCGTTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAGACAGTTATTCAATCATGCCGTGCTGAACACCGGTCCATCTTGTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTGCTTGGACTATATCGTGGAATTACCACAAATATTGCATCTTCAGCTCCAATTTCTGCAGTTTATACCTTTTCCTATGAATCAGTCAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATCATTCTTTTGCCCATTGTGTAGGAGGTGGTTGTGCAAGCATTGCCACATCTTTCATTTTTACTCCTAGTGATCGAATAAAGCAGCAGATGCAAGTTCATTCTCATTATCGCAACTGTTGGGATGCATTGGTTGGAGTTATCAGAAATGGGGGTTTTACCTCCCTATATGCAGGTTGGATAGCTGTACTATGCCGGAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGTTTGAAGGAAGTGATGCCACCAAGTGTTCAACCCAACACATTTCAAACTTTAGTATGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTGCAAAGCAATACGATAGTGTGCTCCACGCCCTCCAAAAAATTATTGAGGGTGAAGGTGTGAAAGGCTTGTACAGGGGGTTGATTCCACGGTTGATTATGTACATGACGCAAGGATCACTGTTTTTTGCTTCATATGAATTTTTCAAAAGGGCATTTTCTCTTGAAGCATCACATCTCACTGATTTATGCGTCCAGGCCAATGACAGAGATGCTGAGAGAGAGACAACTAGGAAGTAA 1965 0.4117 MSESNKSPKNDHQSIKYWWIQQGGASSQTDLSGVDYSPSLSNKENKQQYGSCQPTSPQIRSTAQLISAIGQVCDSASQSLSVLLPKENLNQDDDRFSKEKFLDNIGERKNNLVYTSNGTKFYPLTAGAAKIVRERLDFPKVMQKILVSESPNESQDYIHSLFQRFSKASDKITNKDCKRMELAREEMSFKSGNVYRWACRNAVRMLNCQMNITQPENLETNSSVSGGGISLHTSTPALANEERDVCNSITHQSKSLTNAAIPNTRIVSPLSSDYFLQAVPHAKAEVGDYQKLSSSIYADCHSNSLASCTCASEQCQHGIDENESLEVQGRHLLDITNDEPKLQTFSATHPKPCNSQAKPEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEHRSILYIGKSIVSDRGLLGLYRGITTNIASSAPISAVYTFSYESVKAALLPYLPKEYHSFAHCVGGGCASIATSFIFTPSDRIKQQMQVHSHYRNCWDALVGVIRNGGFTSLYAGWIAVLCRNVPHSIIKFYTYESLKEVMPPSVQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSAKQYDSVLHALQKIIEGEGVKGLYRGLIPRLIMYMTQGSLFFASYEFFKRAFSLEASHLTDLCVQANDRDAERETTRK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3508 654 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 645 - -
Vra7g3508 654 SUPERFAMILY Mitochondrial carrier 360 624 IPR023395 -
Vra7g3508 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 356 440 IPR018108 -
Vra7g3508 654 Gene3D Mitochondrial carrier domain 450 642 IPR023395 -
Vra7g3508 654 Gene3D Mitochondrial carrier domain 336 449 IPR023395 -
Vra7g3508 654 Pfam Mitochondrial carrier protein 540 629 IPR018108 -
Vra7g3508 654 Pfam Mitochondrial carrier protein 449 533 IPR018108 -
Vra7g3508 654 Pfam Mitochondrial carrier protein 360 441 IPR018108 -
Vra7g3508 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 539 627 IPR018108 -
Vra7g3508 654 MobiDBLite consensus disorder prediction 26 56 - -
Vra7g3508 654 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 645 - -
Vra7g3508 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 449 532 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3508 Vra-Chr7 54362916 54367211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3508 364 628 Chloroplast and Mitochondria Gene Families AT1G07030 32.130 7.99e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3508 - - pvu:PHAVU_002G289600g 1109.36