Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3490 ATGAAGTTTTGTACTTTATTGTTGTTGATTGGTTTGGTTTCCGTGCTCTCTTTAGTGGCTTCTGTCGAGTTGCCTTCAAATAATGAAGTTTTGGCACTTAGAAGATTCAAAGAAGCTGTTTATGAAGATCCACGTAAGGCTTTGTCCAACTGGAATACTCTGGAGTCAGATCCTTGTGACTGGAATGGTGTTTCTTGCACTGCAACGCGAGATCATGTCATCAAGCTTAATATATCAGGGGCTTCGTTGAAGGGCTTTCTTGCTCCAGAATTTGGGAAAATCACATACATACAAGAACTGATCTTACATGGCAACAATCTCATTGGAATAATACCTAAAGAACTGGGCATGCTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTGTCTGGACCAATTCCTCCGGAGATTGGAAATTCGACCCAACTTATGAAAATAAACCTGCAGTCCAATGGTTTGACTGGTAGGCTACCTCCGGAGCTAGGAAATTTGAAATACCTTCAAGAACTTCGACTGGACAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTAGCAGTTCAAATTTTTCTTCAAATATGCATGGGAAGTATGCCTCTGGTGTGAATTTAACTGCCTTCTGTCGTTCATCTCAGTTAAAGGTAGCAGATTTTTCATATAACTTTTTCGTTGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGATCAAGCTTTCAAGGAAATTGTTTCCATATCAAAGACATAAAACAGAGAACTTTGGTGCAATGCGGTGCTTCACCTGCCCAAAGTGGTCCAGTAGTGAACCCAAAGTCCGAATCTGCTACCAAACATGTAAAAACCAAGCATCAAGAAACATCAAAACCTGCCTGGCTTTTGGCTATAGAAATAGTGACGGGAACTATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAAAGGTGTAACAACAAATCATCTATCATTATACCTTGGAAAAAATCTGGAAGCGGAAAAGATTATCTGGCAATACAAATAGAGTCGGAGATGTTAAAGGATGTGACGAGGTATACCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGATCCTCACCAGATAGCGTGGTGTACAAGGGTACGATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATAAAGGAAGAAAATTGGACGGGATACCTTGAGCTTTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGGTAACGCAGGAAAACTTCTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAACGGAACACTTTATGATCACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCATGGACACGGCGTATGAAAATTATCATTGGCATTGCACGTGGACTCAAGTATTTGCACAATGAAATCGAGCCAGCATTCACCATCTCAGAGTTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCCAAGCTGGTGGATTTTGAAAGTTGGAAGACCGTTCTTGAAAGATCAGAAAAAAATTCTGGTTCAGTTAGCAGCCAAGGAGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCACGCCATGTTGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCTCCATACTGCAAGTACAAAGGGTACTTGGTGGATTGGGCCAGGGACTATCTCGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCTTCTGTACGTCCATCAATGCGTGAATTATGCATTATGTTGGAGAGCAGAATAGACACATCGATAAATGTGGAGCTAAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCCCTTTCATCATAA 1992 0.4152 MKFCTLLLLIGLVSVLSLVASVELPSNNEVLALRRFKEAVYEDPRKALSNWNTLESDPCDWNGVSCTATRDHVIKLNISGASLKGFLAPEFGKITYIQELILHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNSTQLMKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGSLPGGSSSNFSSNMHGKYASGVNLTAFCRSSQLKVADFSYNFFVGSIPKCLKYLPRSSFQGNCFHIKDIKQRTLVQCGASPAQSGPVVNPKSESATKHVKTKHQETSKPAWLLAIEIVTGTMVGSLFVIGILTAIQRCNNKSSIIIPWKKSGSGKDYLAIQIESEMLKDVTRYTRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLDHGNAGKLLGYCRESSPFTRMLVFEYASNGTLYDHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHNEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTVLERSEKNSGSVSSQGAVCVLPNSLEARHVDPKGNIYAFGVLLLEIISGRPPYCKYKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVITLCISPDPSVRPSMRELCIMLESRIDTSINVELKASSLAWAELALSS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3490 663 Gene3D Ribonuclease Inhibitor 142 263 IPR032675 -
Vra7g3490 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 663 - -
Vra7g3490 663 Gene3D Phosphorylase Kinase; domain 1 339 445 - -
Vra7g3490 663 Pfam Protein tyrosine and serine/threonine kinase 368 634 IPR001245 GO:0004672|GO:0006468
Vra7g3490 663 PANTHER PROTEIN MALE DISCOVERER 2 6 663 - -
Vra7g3490 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Vra7g3490 663 SUPERFAMILY L domain-like 27 236 - -
Vra7g3490 663 SUPERFAMILY Protein kinase-like (PK-like) 344 638 IPR011009 -
Vra7g3490 663 ProSiteProfiles Protein kinase domain profile. 364 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g3490 663 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Vra7g3490 663 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3490 Vra-Chr7 54244315 54248499 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3490 8 638 Receptor kinase-like Gene Family AT2G01210 26.833 1.52e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vra7g3490 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3490 - - gmx:100781978 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1162 11 11666993 11673069 Vra7g3490 7 54244315 54248499 PCT