Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3487 ATGGACGGAACTTCGTCTTCTGTAATTGACTTCGCTGATATTCCACTAAATCTTAATGTCCTTGTCATTGATACTGACCCCGAAGCTCTTGAATTCATCAAGAAATCATGCGAAGAGAATATTCGTTGCAAAGATATTTCTCATCAAGCTGTAATATGTTTTGAATCTTCAATGGCTGTGGAGGTTTTGCTGAAAAAAGAAATAGACATTCATTTGATCGTCATGGAGCTTCATATGCCAATGATGAATGGCTATGAATTCATGCAATTTCTCGATGAAGAAGGATTTGATATTCCTTTTGTCATGATGTCGTCTAAGTCTGATGGTATTCCTTTTTCTTCCATGGAAAAGGCTTTCGAACTTGGGGCTATCGAGTATTTCTTTAAACCCTTCCGTGGTCGTGATCATCTGCTAGATTTGTGGTCACCTTTCTTAAAGCATTATATCGCCAGGCGTAAAGAAGATGATGAGACAAGTGATGGAGAAGCCAAAGCCGATGACACCCTCCACAAGAAAGATGACGATGTCACCCTCCACGAGAAAGATGACACCCTCCACGAGAAAGATGACACACCCTAG 579 0.4059 MDGTSSSVIDFADIPLNLNVLVIDTDPEALEFIKKSCEENIRCKDISHQAVICFESSMAVEVLLKKEIDIHLIVMELHMPMMNGYEFMQFLDEEGFDIPFVMMSSKSDGIPFSSMEKAFELGAIEYFFKPFRGRDHLLDLWSPFLKHYIARRKEDDETSDGEAKADDTLHKKDDDVTLHEKDDTLHEKDDTP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3487 192 SUPERFAMILY CheY-like 18 153 IPR011006 -
Vra7g3487 192 ProSiteProfiles Response regulatory domain profile. 19 144 IPR001789 GO:0000160
Vra7g3487 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 14 178 - -
Vra7g3487 192 MobiDBLite consensus disorder prediction 153 192 - -
Vra7g3487 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 178 IPR045279 GO:0009736
Vra7g3487 192 Gene3D - 17 165 - -
Vra7g3487 192 Pfam Response regulator receiver domain 20 136 IPR001789 GO:0000160
Vra7g3487 192 SMART REC_2 18 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3487 Vra-Chr7 54208213 54211161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3487 3 156 Response Regulator Gene Family AT4G16110 25.325 1.35e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g3487 Response_reg 1.8e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3487 - K02483 vra:106769483 393.275