Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3467 ATGGACAAAGATCAACTGATGTACCCTATCTCATCTTCATCTTCTCCTTCTCCTTCTTACTCTAAACTCCCTCATCATCTTCATCACGTTGCAGAACAAATGAAGCACCGCAGATTTGCATTTCAAACGAGGAGTCAGGTTGATATACTCGACGATGGATATCGCTGGAGAAAGTATGGCGAAAAGTCTGTCAAAAACAATAAATTTCCTAGAAGCTACTACAGATGTTCTTATCGAGGTTGCAATGTGAAGAAACAAATCCAACGACATAGCAAAGACGAAGAGATTGTGGTAACAACCTATGAAGGGACACATTCTCATCCTGTGGAGAAGACAACTGAAAGTTTCGAGCAGATTCTCAGAAACCATCACATATATAGCCTCACTCTATAA 393 0.402 MDKDQLMYPISSSSSPSPSYSKLPHHLHHVAEQMKHRRFAFQTRSQVDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHSKDEEIVVTTYEGTHSHPVEKTTESFEQILRNHHIYSLTL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3467 130 Pfam WRKY DNA -binding domain 51 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g3467 130 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 126 - -
Vra7g3467 130 MobiDBLite consensus disorder prediction 7 21 - -
Vra7g3467 130 SMART WRKY_cls 50 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g3467 130 Gene3D WRKY domain 37 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g3467 130 ProSiteProfiles WRKY domain profile. 45 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g3467 130 SUPERFAMILY WRKY DNA-binding domain 42 109 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g3467 130 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g3467 130 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 126 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3467 Vra-Chr7 54050956 54051909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3467 37 127 WRKY Transcription Factor Family AT5G13080 76.923 1.03e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g3467 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3467 - - gmx:100127378 194.897