Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3454 ATGGAGTTTGTGAAGAAGTGGAAGAGAGTACTGGGAAGAAGCAAGAGATTGTATCCGGAGAACAGCTTAAGTGGAAGCTATGGCAGATTGAGAAACAAAGAAAGGCAACATAGGAAGAAGGGTTGTGTGGTTCCACAAGGTTGTCTTTGTGTCTACGTTGGAGCTGAGAGAGAGAGATTTGTGATCAAGATCGAGATAGCGAACCACCCTTTGTTCAAAGAGCTTTTGGATGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCTTTGTGCCTCCCTTGCCACGTTGACTTGTTCTGTGAGGCACTGACGGAGATGGAAATCGGCACCGCCGAAGAAGGTGTTTTGGGTTCTCATAGTTACAGTCACAACTCATGTTCAGTTTCTAATCCCAGATGTAGATATGCGACAGGGTCTTCGTTATTATGA 432 0.4514 MEFVKKWKRVLGRSKRLYPENSLSGSYGRLRNKERQHRKKGCVVPQGCLCVYVGAERERFVIKIEIANHPLFKELLDGAEREYGYRNDGPLCLPCHVDLFCEALTEMEIGTAEEGVLGSHSYSHNSCSVSNPRCRYATGSSLL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3454 143 PANTHER SMALL AUXIN-UP RNA-RELATED 1 116 - -
Vra7g3454 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 116 IPR003676 GO:0009733
Vra7g3454 143 Pfam Auxin responsive protein 5 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3454 Vra-Chr7 53928037 53928762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3454 20 105 Calmodulin-binding Proteins AT4G34750 37.500 1.00e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3454 K14488 - gmx:102667331 154.836