Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3441 ATGGAGGATGGCCGTCAAAATGAAAATGACAGACATAAGATGGAATACTACCGAGGACCACATTCCATGTGGAATACTGGTTCCCAGCATCAAGTGAAAGAGCCAAATGCACTGGTTATGAATAAGAAGATTAGGTCCATTATGGCAGAAAGGCAGGCTGCTATTCTAGAGCTTGAACTGGAGGCTGCAATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAAGCCATTCGACAGAGGGATGAAGCACTTGTTCAAAGAGATAATGCCATTTTGGAACGGGATAATGCCCTTGCAGCTCTTCAGAGTCGGAACAGTTCTGTCACCTTCCCTTTTGGCAGTGGAATTCAATGTGGATCAAAACGAATTCATCATTCTTCAAACCATCTGTGTATCATGTCTGAAGCTGCATACAAAACAAAGGATGCCTCCCCGATTACAGTTGTACCTTCTGAAGTCAAATCTCATCAAGTAAAGAGAACAAAGGAGAACAAGGTCATTGGTTCTAAGGCATCAAAACCAGCCTACAAAGTAAAGAAAATGGGAGAGGATTTAAACAGGAAGGCTTCTTTTGAAGGTACAAAAATCCGATCTGAATGGCATAGACAAGACGTTGGCCTGAATTTGGTTACATTTGATGAAACTACCATGCCAGTTCCAGTTTGCACATGTACTGGCATACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAGTCATCTTGTTGTACCACAACATTGTCTATGCATCCATTACCACAGCTTCCGAACAAACGTCATGCTCGCATTGGAGGAAGAAAGATGAGTGGAAGTGTTTTTACCAGACTTCTCAGCAGGTTGGTGTTAGAAGGCCATGATTTATCTATACCACTTGATCTTAAGGAGTATTGGGCCAGACATGGAACCAATCGATACATCACTATCAAGTAG 936 0.4295 MEDGRQNENDRHKMEYYRGPHSMWNTGSQHQVKEPNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDEAIRQRDEALVQRDNAILERDNALAALQSRNSSVTFPFGSGIQCGSKRIHHSSNHLCIMSEAAYKTKDASPITVVPSEVKSHQVKRTKENKVIGSKASKPAYKVKKMGEDLNRKASFEGTKIRSEWHRQDVGLNLVTFDETTMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVLEGHDLSIPLDLKEYWARHGTNRYITIK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3441 311 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 311 - -
Vra7g3441 311 SMART GAGA_bind_2 1 311 IPR010409 -
Vra7g3441 311 Pfam GAGA binding protein-like family 13 311 IPR010409 -
Vra7g3441 311 Coils Coil 53 80 - -
Vra7g3441 311 PANTHER - 1 311 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3441 Vra-Chr7 53731136 53735100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3441 1 311 BBR or BPC Transcription factor family AT2G21240 59.236 1.40e-125 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vra7g3441 GAGA_bind 6.3e-95 No_clan