Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3438 ATGGCTCCCTCAGACCAATCTCGCCACTCTCTTGTTCCTGGATTCTTATACTCATCAAAAATACAGTCCCATTTGAGTAATAACACCAATCATGGGTTGCCATTGCTACCATCATCATCCTCCATTGCATCGTATTCATCATCCTCGTCGTTGCCAGTGCAGGGTGGGGCCAAGAGTCCTGTGATCCTTTCACCACAAGAGAAAATCCGCTTGTTTTCTCCTGCCTACTATGCAGCATGCAGTGCCGGTGGGGTCTTCAGTTGTGGACTCACTCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCACATCGGGATTTGGAGTGTTACTGAAGGAGCAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAATTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACGATCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTCATTGCTGATATTGCCCTTTGCCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTATCAGATGGGTTGCCCAAGTTTATCAAGGCCGAGGGTGCTTCTGGGTTGTATAAAGGTATAGTTCCTCTTTGGGGGCGTCAAATTCCATACACGATGATGAAATTTGCTTCTTTTGAGACCGTTGTGGAGATGATCTACAAAAACGTCATCCCAGTCCCGAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATAGCAGGTGTGCTGTGTGCAGTTGTCTCACATCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTATTGGTGATGCTGTGAAGAAAATTGGGGTGGTAGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGAGCACAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGACTGCCTACTACTGGAGGAAGTGCTCCTGCACCTGTTAAGTAG 1104 0.4656 MAPSDQSRHSLVPGFLYSSKIQSHLSNNTNHGLPLLPSSSSIASYSSSSSLPVQGGAKSPVILSPQEKIRLFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGASGLYKGIVPLWGRQIPYTMMKFASFETVVEMIYKNVIPVPKEKCSKNKQLGVSFAAGYIAGVLCAVVSHPADNLVSFLNNAKGATIGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3438 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Vra7g3438 367 Pfam Mitochondrial carrier protein 177 260 IPR018108 -
Vra7g3438 367 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Vra7g3438 367 Gene3D Mitochondrial carrier domain 76 353 IPR023395 -
Vra7g3438 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 367 IPR044677 GO:0005315|GO:1990547
Vra7g3438 367 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
Vra7g3438 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Vra7g3438 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Vra7g3438 367 PANTHER PHOSPHATE CARRIER PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3438 Vra-Chr7 53684105 53687090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3438 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 73.315 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3438 K15102 - gmx:100800530 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3438 7 53684105 53687090 Vra7g3438 7 53684105 53687090 ECH