Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3436 ATGAAGAACTTGCCAACATGGAAAACCATGGCGGTGACTGTGGTGTTACTTCAATTGAGCTTTTTCTTGGAGATTTTCTGTCTCTCTAATCATGCAGATAGAATTGTTCGGCTTCCCGGGCAACCCAACACACGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGATCTCAAACACAAAGCTCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCAGCTTCAAAACCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGGGAAGTTCTGATTAAAAACGAGTACAGTTGGAACAGAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCTTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATTCAGGCACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACGAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAACCCAGTTCTAGAATATGCCACTGACTTGAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGTTTGATATCTGATTCAACGTACAAATTGTTCACTAAAGGCTGTAACTATTCCCGGTACGTCAGTGAATACTACAGAGACTCGATTTCTCCCCTTTGTTCAAAGGTTTTGAGGCGAGTAGCCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAAAAACAGATGATAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCGCTCCATGCCAAGCTTGTCGGAGTCCGAAAATGGGATGTCTGCAGCAACAACAGCATTTTGAACTATGATATGCTAAACCTGGAGAAACCTACACTCCCTGTTGTTCGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTAGTTCAAAAACTGGCTAGACAACTAGGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTCTCATTTGCTACTGTCAGAGGTGCCTCTCATGAAGCCCCTTTCTCTCAGCCTGAAAGATCATTTGTTTTGTTCAAGTCATTCTTGGAAGATAGGCCTCTGCCTGAAATTTTCTGA 1377 0.4277 MKNLPTWKTMAVTVVLLQLSFFLEIFCLSNHADRIVRLPGQPNTRFQQFSGYVTVDDLKHKALFYYFVESETHPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQFRHRDLFLAGESYAGHYVPQLAKLMIEINEKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTKGCNYSRYVSEYYRDSISPLCSKVLRRVARETSKFVDKYDVTLDVCISSVLSQSKAICPQGQKTDDSIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNNSILNYDMLNLEKPTLPVVRSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFLEDRPLPEIF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3436 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Vra7g3436 458 SUPERFAMILY alpha/beta-Hydrolases 37 455 IPR029058 -
Vra7g3436 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 126 IPR001563 GO:0004185|GO:0006508
Vra7g3436 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 177 IPR001563 GO:0004185|GO:0006508
Vra7g3436 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Vra7g3436 458 ProSitePatterns Serine carboxypeptidases, serine active site. 166 173 IPR018202 GO:0004185
Vra7g3436 458 Pfam Serine carboxypeptidase 40 450 IPR001563 GO:0004185|GO:0006508
Vra7g3436 458 PANTHER CARBOXYPEPTIDASE 27 456 - -
Vra7g3436 458 Gene3D alpha/beta hydrolase 27 455 IPR029058 -
Vra7g3436 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 456 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3436 Vra-Chr7 53674958 53678975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3436 312 454 Calmodulin-binding Proteins AT2G22960 27.972 4.22e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3436 K16297 - gmx:100800002 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3436 7 53674958 53678975 Vra7g3436 7 53674958 53678975 ECH