Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3435 ATGGCAAAACAGCAAAACCAGGGAAAAGGCCAAGAGAGGGAATTGGAACTCGAAAGTGACGAGTCTGAGGCTGAGATTGAGGCCCCATTGCCTCTAACTGTGACCTCTCGGGCTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAAGTTCACGCAATGGCTCCAATTGGTTCGTAAGCGCACTGCAAAACATCGTCCTTCTGGCTTCCCTCACCGCACTTCCATCACCATGTCGTCTACTTCTTGCGTTAGGGAACGGTTGGAGGATCCAAAATTGGAGCTGCACCCTGATCAGACAGAAATTAGATTGTGGGAGAGACTTGGGAAGGCTGCAATGTTGGACATTGAGTCGAGCTCTTTTTCTTGGGACATGCTCTCTTCACTGCACCACACTGAACACGATAGTAGCAATGAACAATCCGAAGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGAGGAGTTGTCTTCTTTGCCTTTTTCAATCTGCCTGGGAATGCCGATATTTATCCAAAAGAAGCAGCAGCAGTTATAAAGATATCACCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTACGAATTTGCCAAGTGGTTGGGGGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCAGCCTTGAATGGCAACAAATAAAGGAAGCTGCTGAAAGAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGCGAGGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTCAGCCGGTGTCTCTTTTTTATGAGTTATGTACACGGTTCACCCTTGCTTGAAAGCTCTACTGCATTCAAGTCAAAGGAATCAGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTGCTGATGCTGGACCTAGTCATCAGAAATGAAGATAGGTTGCCTTGCCGTGAGCTTAGATGGCGTGGGAATCCAGCGAATTTGTTGTTGGCTGGAAAGACTATCTGTGCAAATATAGATGTGCTAGAAGCCGCTGTTGATTCTGCAATTGACCGATATAGACCAAAGATGATATGGGCTTTTCAGAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTCGATTCTCACGATCCTGGTTTGATATCACATTCCCCTGATCTTTCAGATATCTCAGAATCTCCAATATCTCTTGACATCAACCATATAAGTCAAACATCTGAAGAATCACTGTCTCCCGACATTAACATAATAGCCATTGATTCTGGTGTTCCTCGGCGACCCCCAGCTGGAAAACGTGCAAATGATCAGGTTAATTACCCTAAGTTGATTGAGTTGTTACTCAACAGTTCTGAATTTGCCTCAAACCTGATATATGATGTAACTGGAGGGAAATTAGGATGTCCTCCTCCATCAGAAGACATGGACAAAACTGATATATATGCGAACGACGTAATGTCTGTAGTTCATGCCTTCCGCGCTGGTTTCCGCGCTGCTCTCAGGGATCTGCAGGGATTTCACATTTTCCTACTCACACTTCACCAAAGACTTGATACCTTGTTACGATCATTTATGAACATTATGAGCAAAATATCTTTGGGAGAATTTGACAAAGAAGATGCTGTAGTTCCTGACTCACCTTCACTAGCAGTTGGTGGGCATTTTTACTCGCCATCATCTAAGGAGAGGCTTGGTAATGATAACCATCATGATTTGATTGATTCAGAACCACAGAGAACTGCTTCAAAGGCATCACCTTCAGGCAACAGAGATTGCACTGACTTTACTCCTACCCCCAGAGAATCTTGCCATGGAAAGTTCTATAGAGGAAATGGGGAACCACTGCGTAGTCTCCGTTTGACTACTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAGTAGAGAATTGGAACAATGGAATGAAATGCTTAAAAGCGATGCCATCAAACTATGCCAGGATAACAATTTCAATCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGCTGTTGACGCATATGAACTTAAGATACGACTTGAGCATATTATCGAGAGAATTGCATTGATATCAGATGCTGCGAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCATTGGCTGCAAGATCTGTTTACACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTATAAGAATTTCTCTGTATGTGATAGTGATGATTACAACATCAGCGGCATATTTGAAGAAGCATGTGATTTGATAGATCATGTTGAACAAACAGGTCAAAAAGTCTTAGTTCACTGCTTTGAGGGGAAAAGCCGAAGTGTTACATTGGTCCTCGCATACTTAATGCTCAGGAAGAAGTATACTTTATTAGAAGCATGGCAAGCTTTGAAGCGAGTTCACTGTCGAGCACAACCCAACGACGGTTTTGCAAAGACCTTATTGGACTTAGATCAGAAACTANATGGAAAGGTTTNGATGGAATGGCATCAGCGAAAACCAATGATGAAAGTTTGCCCAATATGTGGGAAGAATGCTGGGCTAAGCAGTAGCTCACTCAAGCTCCATCTGCAGAAATCACATAGAAAGCTGTCCTCTGGAAGTGTAGATAGTGCCATGACTATGGAAATCGAGAAAGCTTTGACAGCTTTGAAGATTAGCCGTGGAGGGAGTGTCAGCCCCACACAAAGACAATCTCATCCAATAATAGATCAATAG 2772 0.4315 MAKQQNQGKGQERELELESDESEAEIEAPLPLTVTSRALYMLGDITAGPAFKFTQWLQLVRKRTAKHRPSGFPHRTSITMSSTSCVRERLEDPKLELHPDQTEIRLWERLGKAAMLDIESSSFSWDMLSSLHHTEHDSSNEQSEDEMNKALEVTVNSGGVVFFAFFNLPGNADIYPKEAAAVIKISPSRMATQSERLGYEFAKWLGVQTPQGRVIHNTSLEWQQIKEAAERAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLESSTAFKSKESAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAGKTICANIDVLEAAVDSAIDRYRPKMIWAFQKERRSTSVDCRLDSHDPGLISHSPDLSDISESPISLDINHISQTSEESLSPDINIIAIDSGVPRRPPAGKRANDQVNYPKLIELLLNSSEFASNLIYDVTGGKLGCPPPSEDMDKTDIYANDVMSVVHAFRAGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIMSKISLGEFDKEDAVVPDSPSLAVGGHFYSPSSKERLGNDNHHDLIDSEPQRTASKASPSGNRDCTDFTPTPRESCHGKFYRGNGEPLRSLRLTTKLRDFHKFAKVDAESSRELEQWNEMLKSDAIKLCQDNNFNPGFFEGSDNNCAVDAYELKIRLEHIIERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISGIFEEACDLIDHVEQTGQKVLVHCFEGKSRSVTLVLAYLMLRKKYTLLEAWQALKRVHCRAQPNDGFAKTLLDLDQKLXGKVXMEWHQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIEKALTALKISRGGSVSPTQRQSHPIIDQ* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3435 923 CDD DSP 697 834 - -
Vra7g3435 923 Gene3D - 270 367 IPR036940 GO:0016301
Vra7g3435 923 MobiDBLite consensus disorder prediction 547 591 - -
Vra7g3435 923 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 696 840 IPR029021 -
Vra7g3435 923 SMART dsp_5 696 838 IPR020422 GO:0006470|GO:0008138
Vra7g3435 923 MobiDBLite consensus disorder prediction 557 571 - -
Vra7g3435 923 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 923 - -
Vra7g3435 923 MobiDBLite consensus disorder prediction 572 590 - -
Vra7g3435 923 MobiDBLite consensus disorder prediction 1 24 - -
Vra7g3435 923 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 765 817 IPR000387 GO:0016311|GO:0016791
Vra7g3435 923 SUPERFAMILY Protein kinase-like (PK-like) 55 431 IPR011009 -
Vra7g3435 923 Gene3D Protein tyrosine phosphatase superfamily 674 842 IPR029021 -
Vra7g3435 923 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 923 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vra7g3435 923 ProSiteProfiles Dual specificity protein phosphatase domain profile. 696 841 IPR020422 GO:0006470|GO:0008138
Vra7g3435 923 Pfam Dual specificity phosphatase, catalytic domain 717 837 IPR000340 GO:0008138|GO:0016311
Vra7g3435 923 Pfam Actin-fragmin kinase, catalytic 103 417 IPR015275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3435 Vra-Chr7 53666035 53673110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3435 6 919 Protein tyrosine phosphatase (PTP) family AT5G23720 61.797 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3435 K14165 - gmx:100791993 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3435 7 53666035 53673110 Vra7g3435 7 53666035 53673110 ECH