Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3428 ATGGCCGGAACTTCGTCTTCTGAAATTGACATCCCTGAATTTCCATCAAGTCTTAATGTCCTTGTCATTGATACTGATTCCGGAGTTCTTGAATACATGGAGAAATCATGCAAAGAAAAGTCTCATAAAGCTGTAATATGCTTTGAATCTTCAATGGCTGTGGAAGTTTTGCGGAAAGAAGAAATAGAGATTCATATGATCGTCATGGAGCTTAATATGCCAATGATGAATGGCTTTGAATTCCTGCAATTTCTCGATGAAGAAGGATTTGATATTGCTTTTGTCATGATGTCTGATGATTTTACTCTGTCTACCATGACAAAGGCTTTCCAACTTGGAGCTATATTCTATTTCATAAAACCCTTCGGTGATCGGTTGTTAGATTTGTGGCCACCTTTCTTAAAGCATTATTACGACAGGCGTCACTTAGAAGATGATGAGACAGGTGACGGAGAAGCCAAAGCCGATGAAGATGATGAGACAGGTGATGGAGAAGCCAAAGCCGATGATACCCTCCACAAGAAAGATGATACCTTCCACAAGAAAGATTGA 552 0.3967 MAGTSSSEIDIPEFPSSLNVLVIDTDSGVLEYMEKSCKEKSHKAVICFESSMAVEVLRKEEIEIHMIVMELNMPMMNGFEFLQFLDEEGFDIAFVMMSDDFTLSTMTKAFQLGAIFYFIKPFGDRLLDLWPPFLKHYYDRRHLEDDETGDGEAKADEDDETGDGEAKADDTLHKKDDTFHKKD* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3428 183 MobiDBLite consensus disorder prediction 166 183 - -
Vra7g3428 183 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 13 165 - -
Vra7g3428 183 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Vra7g3428 183 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 165 IPR045279 GO:0009736
Vra7g3428 183 MobiDBLite consensus disorder prediction 150 165 - -
Vra7g3428 183 Gene3D - 17 150 - -
Vra7g3428 183 ProSiteProfiles Response regulatory domain profile. 19 135 IPR001789 GO:0000160
Vra7g3428 183 SUPERFAMILY CheY-like 16 127 IPR011006 -
Vra7g3428 183 SMART REC_2 18 130 IPR001789 GO:0000160
Vra7g3428 183 MobiDBLite consensus disorder prediction 145 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3428 Vra-Chr7 53583968 53586576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3428 2 170 Response Regulator Gene Family AT4G16110 25.882 2.83e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g3428 Response_reg 1.5e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3428 - K11526 vra:106769483 219.55