Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3422 ATGAGCTCAGATGCGAGTAGAGAACGAGGTGCATCAGACGTGGTAGAGCGGAAATTTCAATGTAGAACACTTTTGTTTTTGGCATACCAAAGTTTTGGCTTTTTGTTTGGTGACCTGAGCCTATCCCCACTTTATGTCTATCAAAGTATTTTTTCTGGAAGACTAAAACAAGTCCAGAATGAAGATGCAATATTTGGCGCATTTTCTTTGATATTTTGGACTCTTTCAATTGTTTCTTTATTGAAGTATTCAGTTATTCTTTTAAGTGTAGATGATAATGGCGAAGGGGGAATTGTTGCTTTGTATTCACAGCTTTGCAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCTGATGAGGAGCTTTCTACATATCTCAAACTTGGTTCCTCAAATAGAAGTATACCACCATCTCCTTTGAAAAGATTCATTGAGAAACACAAGAGTACAAAGAAGGCTTTGCTTATTTTTGTTTTACTGGGTGCTTGCATGGTGATTTGTGTTGGTGCACTCATGCCTGCCATTTCTGTTCTTTCATCCATTAAAGGCCTGGAAATTGAAGCAAAGATTGCAAACAAAAGTGTGCTGTCTCGTATTTCCTGTGTTCTAGTGATTGGACTCTTTGTTATGCAACACCGTGGCTCCTACAAGGTTGCATTTGTATTTCCTCCCATAATCATTCTATGGTTACTTACTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAACCCACGAATATATGGGGCTCTTTCTCCGCACTATATTTACAAGTTCTTTAGGCTAACAGGAAAAGGTGGTTGGGTTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGGAGACCTCGGTTACTACAGACAAATACCTTTGAGGGTTGCATTTTATTGTGTCATTTACCCATGTTTAGTTCTTCAATACATGGGGCAGGCTGCTTTTCTTTCCAAGAATTTATCTGCAGTGCATATAAGCTTTTATGCTTCTATTCCAGATGTTCTATTTTGGCCAGTATTTGTGGTGTCTGCTTTGGCGGCAGTAGTTTCAAGTCAGGCTGTCATTGCTTCAGCATTCTCAACAGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGAGTTAAAGCAGTGCATTCCAGAAGGTGGATCCCTGGTCAGACATATATACCGGAGATAAACTGGATTCTTATGATAATAAGCTTGGCTGTGACAGTTGGTTTAGGAGACATAAACAGAATAGGACATGCTTACGGGATTGCACATCTGATTCTTGTGTTTGTGACCACATGTTTGACATCACTAGCCATCATTCTTGTATGGAATCGAAGTCTTATAATTGCTCTGGCGTTTGCTTTATCCTTTGGTTCGATAGAGATTCTCTTCCTGTCATCATACAGCCTGAAAATCCTTAAAGGTGGCTGGATTCCACTCGTGCTTTCTGCAGTCTTCATGGTTGTAATGTATGCGTGGCATTATGGTTCCAGGAAAAGGTATTTATTTGACACGCATAACAAAGTTTCAACGAGGACCATCCTTGCATTAGGTCCTAGTCTTGGGATTGTTAGAGTTCCTGGAATGGGCCTTATCTACACTGGATTGGCTACTGGAATCCCTGCCAGTTTTACTCATTTTTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCCGTGGCTTGGGTGCCACGTGAGGAACGTTACCTCATCGGTCGAATTGGTCCCAAATCTTACCGGTTGTATCGATGCATTGTCCGAAATGGTTATAAAGATGTGTGCAATGACGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCTGAATTCATTCAATTGGAAGCAGAAGGTTGCTCTGGAAAGGCAGAAGGTTCAGCGGATGGACGGATGGCGGTGGTGAGAACATCAGGGAAGTTTGGGACACGATTGCTGATGTCGGAATCTTCTGCTTTTCAGGAAGGCAACAATATTAATCTTCCGGGAGCTTTGACCGTTACTAGCAGTAAATCTCCAATATTGAAGAGGCTGCGGGCCATGTATGAGCGGGAATCGCCTGAACACATCACTAGACGACGAATTCGATTTGAGTTGCAAAATGTAATATATTATGACCCACGGGTCAAGGAAGAACTCATGGAACTGGTAGAAGCCAAGTGCACTGGAGCAGCATATGTAATTGGGCATTCTAACGTGAAGGCCAACTGGAACTCATCATTTATAAAGAAGTTTGCTATCGACCTCTACTCTTTTCTCCGGAAAAATTGTCGGGCCCCAGTTGTAGGACTAAACATTCCTTCGATTTCTCTGATTAAGGTAGGAATGAATTACAATGTGTAG 2373 0.4105 MSSDASRERGASDVVERKFQCRTLLFLAYQSFGFLFGDLSLSPLYVYQSIFSGRLKQVQNEDAIFGAFSLIFWTLSIVSLLKYSVILLSVDDNGEGGIVALYSQLCRNAKFCLLPNHQASDEELSTYLKLGSSNRSIPPSPLKRFIEKHKSTKKALLIFVLLGACMVICVGALMPAISVLSSIKGLEIEAKIANKSVLSRISCVLVIGLFVMQHRGSYKVAFVFPPIIILWLLTIFMIGIYNVIKWNPRIYGALSPHYIYKFFRLTGKGGWVNLGGVFLCVTGTEAMFGDLGYYRQIPLRVAFYCVIYPCLVLQYMGQAAFLSKNLSAVHISFYASIPDVLFWPVFVVSALAAVVSSQAVIASAFSTVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIISLAVTVGLGDINRIGHAYGIAHLILVFVTTCLTSLAIILVWNRSLIIALAFALSFGSIEILFLSSYSLKILKGGWIPLVLSAVFMVVMYAWHYGSRKRYLFDTHNKVSTRTILALGPSLGIVRVPGMGLIYTGLATGIPASFTHFLTNLPAFYQVVVFVCVKTVPVAWVPREERYLIGRIGPKSYRLYRCIVRNGYKDVCNDENDFENELVMSIAEFIQLEAEGCSGKAEGSADGRMAVVRTSGKFGTRLLMSESSAFQEGNNINLPGALTVTSSKSPILKRLRAMYERESPEHITRRRIRFELQNVIYYDPRVKEELMELVEAKCTGAAYVIGHSNVKANWNSSFIKKFAIDLYSFLRKNCRAPVVGLNIPSISLIKVGMNYNV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3422 790 PANTHER POTASSIUM TRANSPORTER 3 17 790 - -
Vra7g3422 790 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra7g3422 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra7g3422 790 TIGRFAM kup: potassium uptake protein 27 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3422 Vra-Chr7 53527026 53535978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3422 14 788 Inorganic Solute Cotransporters AT4G23640 59.202 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3422 K03549 - gmx:100819743 1336.63