Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3375 ATGGATACTGACACAAAACAGCGAATCGAGGAAACAGTTCGCAGGATTTTGCAAGAGTCGAACATGGACGAGGTTACGGAGTCTAAGATTCGAAAGCAAGCCTCCGAGGAGCTCGGTCTCAACCTGTCTCAGCCCCAATTCAAAACCTTCGTGAAACAGGTCGTGGGGGCTTTTCTGCAAGAAAAGCAGCAAGAAATAGAAGAACAGCAGCATCAACAGGAAGAAAATGATGAGGGAGAAGTTGAAGAAGGACAAGGAGAATCCAAGGGCAGGGAGTACGATAATGAAGGCAATCTCATCATCTGCAAGCTTTCAGAAAAGAGAAGGGTGAGCATTCAGGATTTCAGAGGGAAAACGTTGATCTCCATTCGCGAGTACTATAATAAAGGTGGCCAGGAACTTCCTTCTAACAAAGGAATAAGTTTGACTGAAGAGCAGTGGTCTATCTTTAAAAACAATCTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAATCTCGTTGA 504 0.4405 MDTDTKQRIEETVRRILQESNMDEVTESKIRKQASEELGLNLSQPQFKTFVKQVVGAFLQEKQQEIEEQQHQQEENDEGEVEEGQGESKGREYDNEGNLIICKLSEKRRVSIQDFRGKTLISIREYYNKGGQELPSNKGISLTEEQWSIFKNNLPAIEKAIKKMESR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3375 167 Coils Coil 59 79 - -
Vra7g3375 167 Pfam Transcriptional Coactivator p15 (PC4) 102 152 IPR003173 GO:0003677|GO:0006355
Vra7g3375 167 Pfam DEK C terminal domain 5 59 IPR014876 -
Vra7g3375 167 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 167 - -
Vra7g3375 167 SUPERFAMILY DEK C-terminal domain 4 57 - -
Vra7g3375 167 Coils Coil 154 167 - -
Vra7g3375 167 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 167 IPR045125 GO:0003713|GO:0060261
Vra7g3375 167 PIRSF RNA_polymII_KELP 1 167 IPR017415 -
Vra7g3375 167 MobiDBLite consensus disorder prediction 63 93 - -
Vra7g3375 167 Gene3D Transcriptional Coactivator Pc4; Chain A 90 167 IPR009044 GO:0003677|GO:0006355
Vra7g3375 167 SUPERFAMILY ssDNA-binding transcriptional regulator domain 101 163 IPR009044 GO:0003677|GO:0006355
Vra7g3375 167 Gene3D - 2 66 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Vra7g3375 DEK_C 4.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3375 K25815 - gmx:100499671 228.409