Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g3375 | ATGGATACTGACACAAAACAGCGAATCGAGGAAACAGTTCGCAGGATTTTGCAAGAGTCGAACATGGACGAGGTTACGGAGTCTAAGATTCGAAAGCAAGCCTCCGAGGAGCTCGGTCTCAACCTGTCTCAGCCCCAATTCAAAACCTTCGTGAAACAGGTCGTGGGGGCTTTTCTGCAAGAAAAGCAGCAAGAAATAGAAGAACAGCAGCATCAACAGGAAGAAAATGATGAGGGAGAAGTTGAAGAAGGACAAGGAGAATCCAAGGGCAGGGAGTACGATAATGAAGGCAATCTCATCATCTGCAAGCTTTCAGAAAAGAGAAGGGTGAGCATTCAGGATTTCAGAGGGAAAACGTTGATCTCCATTCGCGAGTACTATAATAAAGGTGGCCAGGAACTTCCTTCTAACAAAGGAATAAGTTTGACTGAAGAGCAGTGGTCTATCTTTAAAAACAATCTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAATCTCGTTGA | 504 | 0.4405 | MDTDTKQRIEETVRRILQESNMDEVTESKIRKQASEELGLNLSQPQFKTFVKQVVGAFLQEKQQEIEEQQHQQEENDEGEVEEGQGESKGREYDNEGNLIICKLSEKRRVSIQDFRGKTLISIREYYNKGGQELPSNKGISLTEEQWSIFKNNLPAIEKAIKKMESR* | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g3375 | 167 | Coils | Coil | 59 | 79 | - | - | |
Vra7g3375 | 167 | Pfam | Transcriptional Coactivator p15 (PC4) | 102 | 152 | IPR003173 | GO:0003677|GO:0006355 | |
Vra7g3375 | 167 | Pfam | DEK C terminal domain | 5 | 59 | IPR014876 | - | |
Vra7g3375 | 167 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP | 3 | 167 | - | - | |
Vra7g3375 | 167 | SUPERFAMILY | DEK C-terminal domain | 4 | 57 | - | - | |
Vra7g3375 | 167 | Coils | Coil | 154 | 167 | - | - | |
Vra7g3375 | 167 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR | 3 | 167 | IPR045125 | GO:0003713|GO:0060261 | |
Vra7g3375 | 167 | PIRSF | RNA_polymII_KELP | 1 | 167 | IPR017415 | - | |
Vra7g3375 | 167 | MobiDBLite | consensus disorder prediction | 63 | 93 | - | - | |
Vra7g3375 | 167 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 90 | 167 | IPR009044 | GO:0003677|GO:0006355 | |
Vra7g3375 | 167 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 101 | 163 | IPR009044 | GO:0003677|GO:0006355 | |
Vra7g3375 | 167 | Gene3D | - | 2 | 66 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Coactivator p15 | Vra7g3375 | DEK_C | 4.1e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g3375 | K25815 | - | gmx:100499671 | 228.409 |