Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3359 ATGCCTGAAAAATTTTCATTTCATGCTCGCAAACCACACATCCGCACATGGCTAATTCATGTCTCACTAACACTTCTCACTGTAACAGCAACATCGTCATCGTTATCATCATCGCACTGTGCCATGGCCGTCACGCCCTCCACCTCTCTCCTCTCCTTCCTCCAACGCCTCCAAAAAACCGCCTTCGAAGCCTTCGGCGGTACCGATTTCGATCCCAAGACCTACGTCGACGTGCCTCTTAGGTTCGCACTATCCGTTACCCAGGACGCGTTCCAGAAGCTTCCGCGTAACGCCAACGGCACCGTGGCGGCTGAAGATTTAAAGCGCTTTCTAGAAGCCTACTTCGGAGGTGCAGGGGACGATCTGGTGCACCTGACCCCACACGATTTCGTTCGCGAACCGGAGGGTTTCTTGCCCAAGGTCAAACACCCTCAGGTGCGGGCCTGGGCCTTGCAGGTCCATTGGCTTTGGAAAAACTTGACCCGGAAAGTATCCGATGCGGTGCATGCGCACCCGGACTTGCATACGCTGCTCCCTCTCCCCGGTTCCGTTGTCATTCCCGGTTCGCGTTTTCGCGAGGTTTATTACTGGGATTCTTACTGGGTTATTAGGGGCCTGATCGCGAGTAAAATGCACGACACTGCTACTGCTATTGTGACCAACCTCATTTCCTTGATAGAACAATATGGATTTGTTCTTAATGGTGCTAGAGCATACTACACTAACAGGAGCCAGCCTCCCCTTTTGAGCGCTATGATTTATGAGATATACCGTACGACCGGTGACGTGGAATTGCTTAAAAGATCTCTACCTGCACTACTCAAAGAGTATGAATTTTGGAATTCAGATATACATAAGGTGACCATTTTGGATGCTCAAGGTTGCACTCACACCTTAAATCGCTATAATGCAATGTGGGACAAACCCAGGCCAGAATCATCCATTAAGGACCAGGTATTTGCTTCCAACTTCTCTAGTGTTTCAGAAAAACAGCAGTTTTACCGTGACCTGGCTTCAGCTGCTGAATCAGGATGGGATTTCAGCACTAGATGGATGAGAAACCCGCCTAATTTCACAACATTGGCTACAACTTCCGTAATACCTGTTGATTTAAATGCATTTGTACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTGTTGGAGATAATGGCACTGCTGAACGGTTCCTGGAAAATGCTGATCTTAGAAAGAAGGCAATGGACTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGACTACTGGCTCGAAAATACATGTGAGGAGGTTCATGTTTGGAAAAACGGGCGCCAGAATAAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAACCGTTTTATTCAGACACTTCACTTGTGGCTAGTGTCGTTGAAAGTCTCAAAACTTCCGACCTTGTCCGTGCCGCTGGAGTTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGCTGGGCGCCGCTTCAACACATGCTAGTGGAAGGCCTTCTAAAATCTGGGTCGCAAGAAGCAAGGTCATTGGCTGAAGAAATTGCCATCAGATGGGTCACAACCAATTATATCGTTTACAAGAAAACGGGCTTAATGCATGAAAAGCTTGACGTGGAGCATTGTGGAGAATTTGGAGGTGGAGGCGAATACGTGCCCCAGACTGGTTTCGGCTGGTCAAATGGTGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGGAACATAGAATGCTGA 1779 0.4744 MPEKFSFHARKPHIRTWLIHVSLTLLTVTATSSSLSSSHCAMAVTPSTSLLSFLQRLQKTAFEAFGGTDFDPKTYVDVPLRFALSVTQDAFQKLPRNANGTVAAEDLKRFLEAYFGGAGDDLVHLTPHDFVREPEGFLPKVKHPQVRAWALQVHWLWKNLTRKVSDAVHAHPDLHTLLPLPGSVVIPGSRFREVYYWDSYWVIRGLIASKMHDTATAIVTNLISLIEQYGFVLNGARAYYTNRSQPPLLSAMIYEIYRTTGDVELLKRSLPALLKEYEFWNSDIHKVTILDAQGCTHTLNRYNAMWDKPRPESSIKDQVFASNFSSVSEKQQFYRDLASAAESGWDFSTRWMRNPPNFTTLATTSVIPVDLNAFVLGMELNIAFFAKVVGDNGTAERFLENADLRKKAMDSVFWNANMKQWLDYWLENTCEEVHVWKNGRQNKNVFASNFVPLWMKPFYSDTSLVASVVESLKTSDLVRAAGVATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGSQEARSLAEEIAIRWVTTNYIVYKKTGLMHEKLDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3359 592 ProSitePatterns Trehalase signature 2. 493 502 IPR018232 GO:0004555|GO:0005991
Vra7g3359 592 PANTHER TREHALASE 32 592 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PANTHER TREHALASE 32 592 - -
Vra7g3359 592 SUPERFAMILY Six-hairpin glycosidases 70 585 IPR008928 GO:0005975
Vra7g3359 592 Gene3D - 61 590 IPR012341 GO:0005975
Vra7g3359 592 Pfam Trehalase 70 583 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 229 247 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 299 316 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 334 351 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 366 383 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 409 425 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 486 502 IPR001661 GO:0004555|GO:0005991
Vra7g3359 592 PRINTS Glycosyl hydrolase family 37 signature 566 579 IPR001661 GO:0004555|GO:0005991
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3359 44 592 Trehalose Biosynthesis Gene Families AT4G24040 58.770 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3359 K01194 - gmx:547539 1013.45