Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3353 ATGGAGCATTTCTATCTTTCCCTCCTTCTCCTCTTTGTTTCTCTCGTCACCTTCTTCTTCTTCCTCCTTTTCCACAAGCACCGCTCTCCCTTCTCCGCCCCAAACCTCCCACCGGGAGCCACCGGTTTCCCGCTCATCGGGGAGAGTCTCCAGTTTCTCTCCACCGGATGGAAAGGTCACCCGGAGAAGTTCATTTTCGACCGCATGATCAAGTACTCCTCCAACCTCTTCAAAACCTCCATCCTGGGGGAACCCGCCGTGGTATTCTGCGGCGCCGCCTCCAACAAGTTTTTGTTCTCGAACGAGAACAAGCTGGTGGCAGCGTGGTGGCCGGAGAGCGTGAACAAGGTGTTCCCCACGACGGTGCAGACGAACTCGAAGGAAGAGTCGAAGAAGATGAGAAAGTTGCTCCCACAGTTCCTAAAACCCGAGGCTCTCCAACGCTACGTTCCCATCATGGACAGCATCGCACAGACCCACTTTTCTTCCCTTTGGGACAACCACACCCATCTCACAGTCTATCCCTTGGCCAAAAGGTACACATTTATGTTGGCGTGTCGTTTGTTTATGAGCGTTGAGGATGTGAATCACGTAGCGAAATTTGAGAACCCTTTTCATCTTTTGGCGTCCGGAATCATATCAGTGCCCATCGATCTTCCCGGAACGCCGTTCTACAAAGCTATCAGAGCAGCAAAAACCATCAGAAAGGAGCTGTTGAAGATCATCAGAGAGAGGAAAGTTGCTTTGGGCCAAGGAAATGCTTCCCCAACACAAGACATATTGTCTCACATGCTGCTCACGTGCGATGAGAACGGACACTTCATGACTGAATTGGACATTGCAGACAAGATTCTCGGACTTTTGATCGGTGGTCATGACACTGCAAGTGCTGCATGCACTTTCGTCGTCAAATACCTCGCTGAACTCCCTCACATTTATGATGCAGTCTATCGAGAGCAAATGGAAATTGCAAAGTCGAAGTTGCCGGGAGAGTTATTGAATTGGGATGATATAAACAGGATGAAATATTCTTGGAATGTAGCTTGTGAAGTGATGAGAATTGCTCCTCCACTTCAAGGAGGTTTTAGAGAAGCTATCAATGACTTTACTTTCAATGGCTTCTCAATTCCAAAGGGATGGAAGTTGTATTGGAGTGCAAATTCAACACATAAAAGTCCAGAATACTTTCGAGAACCAGAGAAATTTGATCCAAGCAGATTCGAAGGAGAAGGACCAGCTCCTTACACTTTTGTGCCATTTGGTGGAGGACCAAGAATGTGCCCTGGAAAAGAGTATGCAAGGTTGGAAATCTTAGTTTTCATGCACAACTTAGTGAAGAGGTTTAAGTGGGAAAAAGTGATTCCAGACGAAAAGATCATCGTTGATCCCTTACCCATTCCTGCAAAAAACCTCCCAATTCGTCTTTTTCCTCACAAACCCTAA 1443 0.4719 MEHFYLSLLLLFVSLVTFFFFLLFHKHRSPFSAPNLPPGATGFPLIGESLQFLSTGWKGHPEKFIFDRMIKYSSNLFKTSILGEPAVVFCGAASNKFLFSNENKLVAAWWPESVNKVFPTTVQTNSKEESKKMRKLLPQFLKPEALQRYVPIMDSIAQTHFSSLWDNHTHLTVYPLAKRYTFMLACRLFMSVEDVNHVAKFENPFHLLASGIISVPIDLPGTPFYKAIRAAKTIRKELLKIIRERKVALGQGNASPTQDILSHMLLTCDENGHFMTELDIADKILGLLIGGHDTASAACTFVVKYLAELPHIYDAVYREQMEIAKSKLPGELLNWDDINRMKYSWNVACEVMRIAPPLQGGFREAINDFTFNGFSIPKGWKLYWSANSTHKSPEYFREPEKFDPSRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKVIPDEKIIVDPLPIPAKNLPIRLFPHKP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3353 480 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PANTHER CYTOCHROME P450 26 9 476 - -
Vra7g3353 480 SUPERFAMILY Cytochrome P450 29 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vra7g3353 480 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3353 480 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 9 476 - -
Vra7g3353 480 Gene3D Cytochrome P450 26 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3353 Vra-Chr7 52954801 52957846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3353 25 387 Cytochrome P450 AT5G36110 58.197 2.16e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3353 K20667 - gmx:100801007 872.848