Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3339 ATGGCGGGTGTGATGAATAAGAAGGTCGACAAGATTCGCCAAATCGTGCGTCTCAAACACCTCATGTCGCGGTGGAAGCAAATGAGCCTCCGCCGCCGCTCCGAGGACTCTTCGTCCACGCGCCGCCCTCCATCCGGGTTCACCTTCGTCTACGTCGGCCCCGAACGCACGCGCTTCGCAATCCCCGCGCGTTTCCTCAACCTCCCCGTCTTCGAGGGGCTCCTCAAACAAACCGAGGAACAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCTTTTTTCTCTAACGTCGTTAAATTTCTCCACAAGGACGAACACAAGTACGGAAAACTCTCTCTCCAAGACTTCCTCAACTTGGTTTCCGATGCTGACCTTTCAGATTCCTGTAAGGAAAACGTCGTCGTTTTCACCCCTCTGCTGCAGAAAGCAGAGGTTTGA 453 0.5497 MAGVMNKKVDKIRQIVRLKHLMSRWKQMSLRRRSEDSSSTRRPPSGFTFVYVGPERTRFAIPARFLNLPVFEGLLKQTEEQFGLRGNGGLVLPCQVPFFSNVVKFLHKDEHKYGKLSLQDFLNLVSDADLSDSCKENVVVFTPLLQKAEV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3339 150 Pfam Auxin responsive protein 24 106 IPR003676 GO:0009733
Vra7g3339 150 PANTHER - 10 137 - -
Vra7g3339 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3339 Vra-Chr7 52831646 52832777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3339 8 120 Calmodulin-binding Proteins AT3G43120 28.188 1.90e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3339 K14488 - gmx:100797463 241.506