Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3333 ATGAGGTTAACATCACCTGCGATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGTCTTCCCACATTTTCTTTCTCTCTCCTCGCCGCTGACGCCAAGTCGGAGCCGCAGCTTCTCCTCGCCGGGAAAAACGCAACCTCCGTCGTCAATGCCTCGCTTGGGAGATCCGGCGATGATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTTCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTATGCCCAAGAAAAATGAAAGCAAAGAAGAAAAGCCATTTCAGTTCCACGATGTTTTCAACTTAGACAATGAGAATAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCAGTTCTTCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTGTCTGCAACCTGTGGTGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTTCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCGGTGGCTATCCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGTACTTGTGTACCATGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAGCATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAGCAACAAGACTTCGCTTCTTGTTGGGATGTCCCTGGCACAAATTGGGGAATTTTCCTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTGGGAACAACAGCTCTTAGTTTGGTGACTACACCTTTACTCTTCAAGCTAATTCCAGCAGTTGTGCATCTTGGGGCATTGTTGCGGTGGTTCCCTCCTGATAGTTCAACTGAGATTGCATTTAAAGGGGACAGCTTTCGTGTAGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCGTGA 1761 0.431 MRLTSPAILNLLFLCDLLLCLPTFSFSLLAADAKSEPQLLLAGKNATSVVNASLGRSGDDSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVMPKKNESKEEKPFQFHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAASVVKGFGYSNKTSLLVGMSLAQIGEFSFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSSTEIAFKGDSFRVDSAKRITLMVQGSHDS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3333 586 PANTHER K(+) EFFLUX ANTIPORTER 6 11 586 - -
Vra7g3333 586 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra7g3333 586 Gene3D - 162 545 IPR038770 -
Vra7g3333 586 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 11 586 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3333 Vra-Chr7 52760354 52769163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3333 51 586 Antiporters AT2G19600 85.529 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3333 - - gmx:100788884 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3333 7 52760354 52769163 Vra7g3333 7 52760354 52769163 ECH