Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3332 ATGGGGAGGAAGTGCTCGCATTGTGGAATTATAGGGCATAATTCAAGGACCTGCACATCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGTCTCTTTGGCGTGCAATTAGACACTTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCATTTTCTTCTTCAAGAATAACCATCGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGATGGTCTCATAGGTCGAGTTCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTCGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCCAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCAAGTCTGTTTGACGTGCAGGTGGGTAGCAACAACGTAGGAGGTTGTAATTCAGTTTCGGCTTATCATAAAAAAGATGATTCGAAATGTGAAGTTAAGAATAGTGATGCCACTTTGTCGTTGCTAGGGCGCATAACCTACTTTCAACAAGAAACGAAATCGGATTATAAGAAGCAAGAAAAGCTTGATAATTGCCCTCATCAAGTTCCTAATCTGGAGCTTACTCTTCGTTCCTGCTTGGGACAATTAGTATGA 708 0.4294 MGRKCSHCGIIGHNSRTCTSLRGSSFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRITIDENSDRTSFGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDVQVGSNNVGGCNSVSAYHKKDDSKCEVKNSDATLSLLGRITYFQQETKSDYKKQEKLDNCPHQVPNLELTLRSCLGQLV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3332 235 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Vra7g3332 235 CDD SANT 94 139 IPR001005 -
Vra7g3332 235 PANTHER TRANSCRIPTION FACTOR KUA1 1 216 - -
Vra7g3332 235 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Vra7g3332 235 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Vra7g3332 235 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 216 - -
Vra7g3332 235 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Vra7g3332 235 Gene3D - 93 145 - -
Vra7g3332 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Vra7g3332 235 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Vra7g3332 235 SMART sant 91 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3332 Vra-Chr7 52753207 52754503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra7g3332 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3332 - - gmx:778093 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3332 7 52753207 52754503 Vra7g3332 7 52753207 52754503 ECH