Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3331 ATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGGAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAGAGATATTTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGCAAGAGGGTATGGGGATTTTCAAGATTTACCACCGACTGTGCCTCCAGTAATTGGAGATCCAGTTTAGGAACTGCTTCAGATCAGAAAGAAGTTATAACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTCATGTGGAGGTGTCGCCGCAGAGGCCAAGAGAGTTGAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCTAAGATGGAACTGAACATGGGTTGTTCATTGAAACTTGGAAGAAGCTTGAAAGACAACAGTGGACATGGAGGTATAATTAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCCGAACAAGGGTCACCACCACTGACTGCAACTGATGTTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTTCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTCACCTTCGTTCACGAGGGACTGACAAACCTAGAGGATATTGAGTCTGACTCCGAGAGCGAAAAGCTTAGCATTTCGTCCAAGAGTTCATATTTTCAGCCATGGATTGCGAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACGTGCAAAGATCCAGCGACAAGACTTTGACCACTGCCTATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTGGGAATGCTTAACTGTAAAATTGACGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCACTGGCTAAAGGTTCACCTCCTGGGCCTCCTCCACTGTGCTCCATTTGTCAGCACAAGGCACCGGTGTTCGGCAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACCGGTGGTTTTTCACAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCTGTACACCGTGGAGTTCTGCATGACGGACAAGTGATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTTGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGAACGGAAGAAGAATGCTGGTTTATGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTTCTGGAATGGTCTGCAAGACAAAAGATTGCAGTTGGAGCAGCACGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGCGGCCCAATAATATCCTTCTAACTCATGATTTTGAAGCTTTGGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGAGTCATAGGAACATTTGGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGGATAGTACTGCTTGAACTCATCACAGGAAGAAAAGCAGTGGATATAAATCGCCCCAAAGGCCAACAATGTCTCAGTGAATGGGCACGGCCATTGCTTGAAAAAGAAGCTATTTATAAACTAGTAGATCCGAGTTTAAGAAACTGCTATGTTGATCAAGAGGTATATCGCATGCTGCAATGTTCCTCTTTATGCATTGGACGAGATCCTCATTTAAGGCCTCGAATGTCACAGGTGCTGAGGATGCTGGAAGGTGACATTCTACTGTGA 2034 0.443 MSSQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWGFSRFTTDCASSNWRSSLGTASDQKEVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSSCGGVAAEAKRVESSWVILDKKLKHEKKYCMEQLHCNIVMMKRSRPKILRLNLNSSPKMELNMGCSLKLGRSLKDNSGHGGIIRGPAVTPASSPEQGSPPLTATDVGTSSISSSDPATSPFFHSDNYERQRRGFTFVHEGLTNLEDIESDSESEKLSISSKSSYFQPWIANVICMDGDFSKHEDNVQRSSDKTLTTAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAISLAKGSPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLHDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVENGRRMLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELITGRKAVDINRPKGQQCLSEWARPLLEKEAIYKLVDPSLRNCYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILL* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3331 677 MobiDBLite consensus disorder prediction 204 249 - -
Vra7g3331 677 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 677 - -
Vra7g3331 677 Gene3D Transferase(Phosphotransferase) domain 1 477 675 - -
Vra7g3331 677 SUPERFAMILY Protein kinase-like (PK-like) 381 672 IPR011009 -
Vra7g3331 677 Pfam Protein tyrosine and serine/threonine kinase 405 671 IPR001245 GO:0004672|GO:0006468
Vra7g3331 677 MobiDBLite consensus disorder prediction 216 249 - -
Vra7g3331 677 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Vra7g3331 677 CDD STKc_IRAK 407 673 - -
Vra7g3331 677 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g3331 677 PANTHER OS01G0253100 PROTEIN 17 677 IPR045271 GO:0004714|GO:0006468
Vra7g3331 677 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3331 Vra-Chr7 52737946 52742042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3331 381 675 Trihelix Transcription Factor Family AT1G70460 51.163 7.73e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vra7g3331 PK_Tyr_Ser-Thr 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3331 - - gmx:100305413 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3331 7 52737946 52742042 Vra7g3331 7 52737946 52742042 ECH