Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3323 ATGGAGAACATATCTGAGCCAAAAGTGTTCGCAAATACAGTCATATTGCAGAGTGAGGGATTACTAAAGTATATATTGGAGACTGGCGTTTATCCACGAGAAGCAGAGACCCTCAAAGAGCTAAGAAATGAAACTGCAAAGCATCCCATGGGTTTCATGGGTGCTGCACCTGATGCGGGTCAGCTAATGGCCATGCTCTTGAAGGTTTCGAATGCTAAAAAGACAATAGAAGTTGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACAATTCCAGATGATGGAAAAATTATAGCGATGGATCCAAACAGAAAAGCATATGAGATAGGGCTACCATTCATTAAAAGGGCTGGTGTTGAACACAAGATCGACTTCATAGAGTCTCCAGCTTTACCAGTTCTTGATAAGCTCTTAGAAGATGCTGGAAATGAGGGGAGTTTTGACTTTGCATTCATTGATGCTGACAAAAAGAATTACTGGAATTACCACGAGAGAGTTATGAGATTGGTGAAGATTGGTGGAATAGTTGCATATGATAACGCATTGTGGGGAGGAACTGTTGCCTTGCCTGAAAAGGCAGTTTCGAAGGATAAACAAGAGTGGAGACTATTATCACTAGCTTTCAACGAAGCAATTTCAAAGGATTGTCGTGTTGAAATTGCTTTTGTTTCAATCGGTGATGGAGTCATTATCTGCAGGCGTATTGCTTGA 717 0.4128 MENISEPKVFANTVILQSEGLLKYILETGVYPREAETLKELRNETAKHPMGFMGAAPDAGQLMAMLLKVSNAKKTIEVGVFTGYSLLLTALTIPDDGKIIAMDPNRKAYEIGLPFIKRAGVEHKIDFIESPALPVLDKLLEDAGNEGSFDFAFIDADKKNYWNYHERVMRLVKIGGIVAYDNALWGGTVALPEKAVSKDKQEWRLLSLAFNEAISKDCRVEIAFVSIGDGVIICRRIA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3323 238 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
Vra7g3323 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Vra7g3323 238 PANTHER O-METHYLTRANSFERASE-RELATED 4 237 - -
Vra7g3323 238 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 4 237 - -
Vra7g3323 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Vra7g3323 238 Pfam O-methyltransferase 30 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3323 Vra-Chr7 52676590 52678382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3323 15 237 Monolignol Biosynthesis Gene Families AT4G26220 64.126 1.36e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3323 K00588 - gmx:100795229 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3323 7 52676590 52678382 Vra7g3323 7 52676590 52678382 ECH