Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3322 ATGTCCGCTAATCCAGTAATACTGCAGAGTGAGAAGTTGACCAAGTATATACTGGAGACTAGCGTTTACCCTCCAGAAGCCGAGACTCTCGAAGAGCTAAGGAATGCCACCGCAACACACTCTTGGGGATTTATGGGCGCTGATCCTGATGCGGGGCAGCTAATGGCCTTGCTCTTGAAGCTGTTGAATGCTAAAAAGACCATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTCACTGCACTAACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGATAGAGCGTGTTCAATGAACACCATTTCCAATGTTTCGTACTATGATCCAAGTTAA 345 0.4551 MSANPVILQSEKLTKYILETSVYPPEAETLEELRNATATHSWGFMGADPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDRACSMNTISNVSYYDPS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3322 114 PANTHER PROTEIN, PUTATIVE-RELATED 2 99 - -
Vra7g3322 114 Gene3D Vaccinia Virus protein VP39 2 109 IPR029063 -
Vra7g3322 114 Pfam O-methyltransferase 19 99 IPR002935 GO:0008171
Vra7g3322 114 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 99 IPR029063 -
Vra7g3322 114 PANTHER O-METHYLTRANSFERASE-RELATED 2 99 - -
Vra7g3322 114 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 114 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3322 Vra-Chr7 52672643 52673948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3322 7 98 Monolignol Biosynthesis Gene Families AT4G26220 68.478 7.47e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3322 K00588 - vra:106767922 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3322 7 52672643 52673948 Vra7g3322 7 52672643 52673948 ECH