Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3294 ATGGAGAGAACCATTAGGTGGTTGAAGGGATTGTTTGGGATAAAGACAGACAGAGCGCACAGAGAAAATTCAAATCCTGGCTCCAAATGGTGTCACTCAGACAGAGATTCCAGAGGTTTATGTCATAATCCTACCACCATTCCTCCCAATATTTCACCTGCTGAAGCTGCTTGGCTACAATCCTTCTACTCAGAAACTGAGAAGGAGCAGAACAAGCATGCCATTGCAGTTGCTGTAGCCACTGCAGCAGCCGCTAATGCTGCGGTGGCTGCGGCTCAGGCTGCTGTAGCAGTGGTTAGGTTAACCAGCCATGACAATGGCAGAGACACTATGTTTGATGGTGGACAAGAAAAGTTGGCTGTTGTCAAGATTCAAACTGTGTTTAGAGGATACTTGGCAAGGAAGGCATTGAGAGCTTTAAAAGGATTGGTGAAGTTACAAGCACTAGTGAGAGGGTACTTGGTGCGGAAGCAAGCGGCAGCAACCCTACTCAGCATGCAAGCTCTAATTAGAGCTCAAGCCACAGTAAGATCTAAGAAATCTCAGGGACTCATGAGCACAAAGAATGAAGCACACAGGTTTCAAACACAAGCACGAAAATCCATGGAGAGATTTGAAGACATACAGAGTGAGTACATAGCTCCCATCCACAGCAGAAGGCTGTCATCTTCCTTTGATGCCACAATGAATAATGCAAGCAACAGTTTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTGGTAGGCCAAAGTCAAGGTCTCGCAGGAGCAACACATCAATGTCAGATTTTGGTGATGACCCATCATTTCAAACACTTCCTTCTTCTCTCCCATTCAATCATTTATCCATACCGAACCACAGGACTTTCCTGGACTCAGAGTGGGGTTTAACAGGAGAAGAGTGCAGATTTTCAACAGCACAAAGCACTCCACGCTTCACCACCAACTCTTGTAGCTGTGGCTCTCTTGTTGTTGCCCCTATGACACCTAAAAGTGTTTGTAACGAAAACTTCTTCTATGGGCAGTACCACAATTTTCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCTAAATTGAGGTCTCATAGTGCTCCGAAGCAGCGGCCAGATCCTGGTTCAAAGAAGAGATTTACCCTCAATGAGATGATGGAGTCCAGGAGTATTTTGAGTGGGGCTAGAATGCAAAGGTCTTGCTCACAGATTCAGGAAGCCATTAATTTTAAGAATGCTGTGATGAGTAAGCTTCAGAAATCCACAGAATTTGGTAGGGAAACAACACCAACTTTTCCAACCAGAGGAGGTGGCGATTGGTGA 1317 0.4563 MERTIRWLKGLFGIKTDRAHRENSNPGSKWCHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAVATAAAANAAVAAAQAAVAVVRLTSHDNGRDTMFDGGQEKLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLLSMQALIRAQATVRSKKSQGLMSTKNEAHRFQTQARKSMERFEDIQSEYIAPIHSRRLSSSFDATMNNASNSFDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQTLPSSLPFNHLSIPNHRTFLDSEWGLTGEECRFSTAQSTPRFTTNSCSCGSLVVAPMTPKSVCNENFFYGQYHNFPNYMASTQSFKAKLRSHSAPKQRPDPGSKKRFTLNEMMESRSILSGARMQRSCSQIQEAINFKNAVMSKLQKSTEFGRETTPTFPTRGGGDW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3294 438 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Vra7g3294 438 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Vra7g3294 438 PANTHER IQ-DOMAIN 5-RELATED 1 420 - -
Vra7g3294 438 SMART iq_5 116 138 IPR000048 GO:0005515
Vra7g3294 438 SMART iq_5 139 160 IPR000048 GO:0005515
Vra7g3294 438 MobiDBLite consensus disorder prediction 232 269 - -
Vra7g3294 438 Pfam Protein of unknown function (DUF4005) 311 394 IPR025064 -
Vra7g3294 438 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Vra7g3294 438 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Vra7g3294 438 MobiDBLite consensus disorder prediction 254 269 - -
Vra7g3294 438 Gene3D - 116 159 - -
Vra7g3294 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3294 Vra-Chr7 52459135 52462054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3294 1 395 IQD Protein Family AT3G16490 49.875 5.20e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3294 - - var:108346918 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3294 7 52459135 52462054 Vra7g3294 7 52459135 52462054 ECH