Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3248 ATGTATAGATCATTTCTGAAATGTGATGATCCAAAAGGAGTTGTGGGATGTGGGACAATCAGGAAATACAGAACTCGTTCTCACAAAGTGAAGGACAAGACAAAAATGCAGAAGACAAGTGAAATAATGGAAACATCCTTGATCTACAAGAGATACAAAGAGGAGAAGAAGGTCGCCAAAGAATGCGATGGAAATCTCGTTGGTCCATCATCTTTGCAGCTCACAAAGGTCTCCGAAGAGGATCATAGCTTGAAAAATATGCTAGATTCATGGTCTAGAGATATTATATGTGAAGGAAAGTCGGAAGATATAGCAAAAGGTATTTTAAAAGGGGCTCTTGGTCTGCAAGATTCTCTAAGCATGCTTCGCAAGTTGCAAGAGGAGGCCGCACAACAACATACAGCTCCTTTTGTGAGAAAACAGACTGAGAAACCAGAAAGAGACAGAATTGATGAAAACAAGATTGGTATAAGGCAGGCTAATCCATTAGGTGAACAAAGTAATACAAAGGGGTTTCAAAGACCACAGCTTTCTGCTGGTGGTTCTTCAATTAACTGCAAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGACGGATTTAATTCAGCTTCAGAAACTTTTCGTATAAGCACAAGCCAATGTTCTGGGGTCAAGACTGACAGCCTTTTTGATCCTTCTTTATCAGTAATTGCTTCAAGGATTGAAAAAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGGCCCCTCAAAATCATTTCCAGCTGCTAAGCAAAAACTATTGGGTGGTGAGATAGATAAGTCAAAGGTCAGAAACAATGATTCTACAGCTGAGAAGGTTAATCCAGAACTAAAAGTCGTGAGGGAAACTCTTGAGACTACGCATTTCAAAGGTATTTTTAAGGAGAATTTTGTGAAAGATTCTAAGCTTCATGTGCATCATCATTTCAATGACACCAGTTCCAAGCAGTTTGTTGATTTATCTCACATTTCACCTACGGAACCTCAATGTACAATTTACCAACAATCAGAAAAAAGTGCCTATATTCCAGTTCTTCCAAAGGAGTTGACAAAACTGAGAAGAGAAATACTCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGGAATGGAAAAGGGTATTAGGAAACGGCTTAAGAAAGAGGGAGAACCAAAATTTCTCAAAGAGGTTATTAAAGTGGATGCAAAAGGAAGCAGTCCTGTTGAAGAATATGCGGGTAAGGTAAAACTGTATTGTCACATTGGTCATACATCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTACGGCCCATTAGCAGAAAACAGACAGAAAAGGATATCTCACAACCAACAATTGTGGCAGAACATCAGTACAAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGTGGATCCAGAATCGACAAGAATGAGATTTCCTGCCTAAAGAGTAGAGGTTCAAACAACATCTCCACTAAAAAAACTACGAATTCCAAGGACGTCAAAGTTGAGAATAAAAAAGTTAATTCCGTGGTAGATTCCTTAACAGGTAGAAAGAATCAAATGAAAAAACAAAGCCCTGTTGCTGAGCCAGAACTGGCTAAACTAAATGTTGAACAAACCAGGCAGAGAGAAAAGAAGAAAAATTACCCCGAGATTAGAATCTCCACTAGACTAGAAAATGAGCTCCTGATGGTGTGTGAAGCAGATGCCTTCATAAATAAGATTGGAGAAACTGAATATAAAAATGATGATATCAATGCTTATAGCGTCGACGCTGACAGAGAAGGGACAGAGCTGAAACATTTTCTTCTAACGAGTCCATCATTCATAGGACATGCAAAGAAGCTCTTCAATCTTGATGTGGATCATCACAACACCCTAGAAAAGGATGAAACCATTTACAGCATGACAAACATGAGGCTTTACTTGGATTGCGCTTATGAACTGACAGAACGTAAAAGTCTTCAAGACTCCGAAGTCGTTCGTTCTCTCTTGCTGGCATGTGGGGGAAACTCAAGATTACGCATCTCCTTATGCAAGTTGGTGGAAGAAATCTGTGATGGCATTGAGAATCTGAAATTTTACAGAGAAGATTATGCTTGTAGAGAGGAAGATTTTGCGTACAATGACACATTTGCAATGATGGAGAAAGACATGAAGTGCAAGGAAGAGATAAATGGAATGTGGGAAAGTGGTTGGAGAACAGGCTTTTGTGCAGATGAGGCTCAACTGGTAGTCAATAAAATAGAGAGCCTCCTTATAAGTGGATTAATTGAGGACCTTGTGATCAATTTATTAGCTTAA 2379 0.3905 MYRSFLKCDDPKGVVGCGTIRKYRTRSHKVKDKTKMQKTSEIMETSLIYKRYKEEKKVAKECDGNLVGPSSLQLTKVSEEDHSLKNMLDSWSRDIICEGKSEDIAKGILKGALGLQDSLSMLRKLQEEAAQQHTAPFVRKQTEKPERDRIDENKIGIRQANPLGEQSNTKGFQRPQLSAGGSSINCKEELKKVIKESLVRQNMFPKTSDGFNSASETFRISTSQCSGVKTDSLFDPSLSVIASRIEKGPSLVFKLMGLEEGPSKSFPAAKQKLLGGEIDKSKVRNNDSTAEKVNPELKVVRETLETTHFKGIFKENFVKDSKLHVHHHFNDTSSKQFVDLSHISPTEPQCTIYQQSEKSAYIPVLPKELTKLRREILSSKTIKHRKGSSSTNMGKGMEKGIRKRLKKEGEPKFLKEVIKVDAKGSSPVEEYAGKVKLYCHIGHTSHVNETIDRKWKVRPISRKQTEKDISQPTIVAEHQYKREIPSTKLRKLKSGSRIDKNEISCLKSRGSNNISTKKTTNSKDVKVENKKVNSVVDSLTGRKNQMKKQSPVAEPELAKLNVEQTRQREKKKNYPEIRISTRLENELLMVCEADAFINKIGETEYKNDDINAYSVDADREGTELKHFLLTSPSFIGHAKKLFNLDVDHHNTLEKDETIYSMTNMRLYLDCAYELTERKSLQDSEVVRSLLLACGGNSRLRISLCKLVEEICDGIENLKFYREDYACREEDFAYNDTFAMMEKDMKCKEEINGMWESGWRTGFCADEAQLVVNKIESLLISGLIEDLVINLLA* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3248 792 PANTHER OS01G0228800 PROTEIN 1 788 - -
Vra7g3248 792 PANTHER OS01G0228800 PROTEIN-RELATED 1 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3248 Vra-Chr7 52070075 52074793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3248 624 787 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.333 3.83e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3248 - - var:108346558 1463.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3248 7 52070075 52074793 Vra7g3248 7 52070075 52074793 ECH
Vra7g3248 7 52070075 52074793 Vra1g0524 1 6191266 6195608 PCT