Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3210 ATGGCAGAGAGTTCTTCGTCATTAGCTATGCCCACTTCTCCCACTAAGTATGATGTGTTTCTGAGCTTCAGAGGAGAAGATACGCGTTACAATTTCATCAGTCACCTTTATGACGCACTGCACAGGAACCACATCGAAGCATATATGGATCAGAGATTACAAAGAGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTCGTTTTCTCCGAAAACTATGCATCTTCCACGTGGTGCTTGAATGAACTGATTAAGATACTTCACTGCAAGAAGATATATGAAAGGGATGTGATACCTGTTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAGAAAGATACAAAGCAGCTTTCGATGAGCATGAACAGCGGTTTAAAGACGACATGGACAAAGTGCAAAGATGGAAGGATGCTCTAACCGAAGCTTCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGGTCAGAAAACACACTTGTTGAAGAAATTGTTAAAGATATTTTGAAAAAATTGGATCTTTATTCCATTAGTTATGATCCAGGAATTATCGGCATTGAAAAACATATTGAAAGCATTCGGTTATTGATGCGTTTTGAGTCATCAGATATTCGGATCATAGGAATTTGTGGTATGGGAGGAATAGGAAAAACTACAATTTCTGAACAAATATATCACACATTTGCAAAGCAATTTGATTCCAGAAGTCTTGTTTTAGACACTCAACAAAAAATAGAAAGAGATGGAATAGACACTGTCAGAAAAAAATATATGTCTGAGCTTCTAAATGAAGTACCATCTCCTAGTTTATACTACAGTGAAAGACTCAAACAAGTGAGGATTCTTATTATTCTTGATGATGTTACTGATTCGGTTCAACTTAAACAATTGTTAGGAAGGTGTAATAGTTTTGGACAAGGCAGTAGAATTATTATAACCAGTAGAGACATTCAAGTGTTAAAGAATGTTGGAGCTGATGACATCTACGAAGTTGAGAAGTTGAATGAACTCAATTCTCTAAAACTTTTTACTTTACATGCTTTTAAACAAAACTCTTCACAGGAAACAACGTACATGGACTTGGTAGAAGAGGTGTTGAGATATGCCAAAGGAATTCCATTAGCTCTCCAAATTTTGGGCTCATTACTTTATGGCAGAACAAGAGAAGCATGGGAAAGTGAGTTACAAAAGTTGAAAAAATGCCAACATCTTAAAATTTTTAGTGTATTAAAATTAAGTTATGATGGGCTTGATGAGGAGGAGAAGAATATATTTCTTGACATCGCATGCTTTTATAGGGGAGACGAGGAGAGTGTGGTACAAGAAAGATTAGATGACTGTGGTTTTTCTTCTAAGATTGGAATGGATATTCTCAAAGACAGATGTCTAATATCTATCTCTCATGGTATAATTGAAATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTCAAGAGTGTCCTCATTATCCTGGAAAACGTAGTCGGTTGTTCAAGGGTGAGGAAAGTCTTGAGGTTTTAAAAAAGAACAAGGGGTCAGATGCAATTCAGGGTATCTTACTAAATTTGCGGGAAATAAAAGAAGTTATAGTACATGGACAAACATTCGAAAAGATGGATAATCTTAGGATGTTTATGCTCTTTGATTATTTATCTTATGGGTCCAGAGTTGCATCGTCTATTGTAACTCTACCAGATACTTTGAAGATTTTTTATTGGCACGGTTTCCCTCAAAGATCTTTACCACCGAACTTTTGCCCAGAAAATCTAGTGAGACTCGAAATGCCATACTGCGATCTTGAACAACTTTGGGAAGAAGATCAGAGTTTACCGAAGTTGAAAAGGCTCGACCTGAGTTATTCTGATAAACTTAGTAGAATACAAGACCTTTCCCTGTCACCAAATATTGAAGAAATAATTCTGAATGATTGTCCAAAGTTGATTAAAGTTCACTCTTCCATATTACTCACCAAGCTCACTTCTTTACGTTTAGATGACTGTCATAATCTCAATAGTGCAATTGTTCCCAGCAATATTCTATCCAGATCACCACCAGGATGCATTAATCTTTCCTGGTGTGGCAAGCTTGAAATGTTTTCAATCAGTCAAACCCAAATATGTTATGCTCCACCATCGTCATCATTAATCGGTCCAATATTCCCTCATGTCAAACCGAGGCCTCAACGTCGAAATTTCTTAGGACCACCGCGCATTCTTTTTCCTGAAAATCTCTTCAGATACAATGTCACTGAAATTTCCTCCATTACTTTTGACCGATATTGGGAATCAGATGAAGAAAAAGAAGTGACTAATAAGATCTGTTTCATAGATCTCTCAAACTGTTCTTCCCTTACAATATTTCCATTTGACCTTTCTCAGATTAAATTCCTAAACAAACTTTGTCTCAGAGATTGCTCAAAATTGCAAAATTTCCCTGAGATTGAGAACACTATGGAAAATTTAGCGGTTCTAATCTTAGACGGCACAGCCATACAGGCACTGCCTTCATCCTTGTGGCGTTTGGTAGGGCTTGAACAACTGAGTTTGCGAGGTTGCAAGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTAGACCTTACCTTCTGTGAATCACTTCAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGTGTGGATGCTTTAACTTGAGAACCTTCCCAGAGATCACGGAGCCGGCACAAACTCTTGCTCACATTAACTTAACACATACGGCTGTTAAAGAACTGCCTTCCTCATTTGACAATTTGGCTAAGCTTCGATCCCTACAGCTCAACAGGTGCACTGATCTCGAGTCACTTCCAAACTCCATTGTTAATCTTAAGCTTCTCTGTAAACTTGATTGTTCGGAGTGTGCCAAATTAAAAGAAATCCCAGCACACATTGGTAGCATGTCGTCATTAATGGAACTGTCACTGAGTGAGAGCGGAATCGTGAACCTTCCTGAAAGCATTGCTCATCTTTCAAGCTTGAAATCACTTGATTTAAGTGGCTGTAAAAATCTTGAATGCATCCCACAGATTCCACCTTTTCTAAAACAACTGGTGGCATTGGACTGCACATCAATTAGAAGAGTGATGTCAAATCAAAACCTCTCAGATTCAAAGGAGGGTGTCTTCAAATTTCATTTCACCAATGCCCAACAACTGGATTCAAATGCTCGTGCTAACATTGAGGAGGATGCAAGGCTCAGGATGACCCACGATGCGTGTAGGTCCGTGTTCTTCTGTTTTCCAGGGACTGCAGTTCCTCATTGGTTCCCCTTTCGTGGTAAGGGAAGTTCAGTGACTACAAATGAAGATTTAAGTTTTTGCAGCGATGATAGGCTCATTGGTTTCGCTTTGTGTATTGTTTTTGGAGTGTTAGATACGAATGCTATTAAAGACAGATTCTTATATTTTGGTTACAGCCTAAAATTTGAATGTGATGATGATGGCACACAGATAATTCCAAATAATGATGAGTTAATCAACTATTTCAGATGGGGTTATAGTTACAGAGTCCTTGATAAAGATCACACATTTATGTGGAAATTTAACTTGGAGAGCGTAAGGAGGAGCGGCATGAACCTTAGGAGGCTCAGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCAAAGGCTTGCAACTTTCTGCTGCCAGATTATCGCTCAATAATGACAATAAAAGAATGCGGAATGTGCCCTCTTTATAGCAGCGGAAGCAATGTTGCATAG 3804 0.3854 MAESSSSLAMPTSPTKYDVFLSFRGEDTRYNFISHLYDALHRNHIEAYMDQRLQRGEEISPALQTAIEESKIYVLVFSENYASSTWCLNELIKILHCKKIYERDVIPVFYKVDPSTVRKQEERYKAAFDEHEQRFKDDMDKVQRWKDALTEASGLSGWDSNVIRSENTLVEEIVKDILKKLDLYSISYDPGIIGIEKHIESIRLLMRFESSDIRIIGICGMGGIGKTTISEQIYHTFAKQFDSRSLVLDTQQKIERDGIDTVRKKYMSELLNEVPSPSLYYSERLKQVRILIILDDVTDSVQLKQLLGRCNSFGQGSRIIITSRDIQVLKNVGADDIYEVEKLNELNSLKLFTLHAFKQNSSQETTYMDLVEEVLRYAKGIPLALQILGSLLYGRTREAWESELQKLKKCQHLKIFSVLKLSYDGLDEEEKNIFLDIACFYRGDEESVVQERLDDCGFSSKIGMDILKDRCLISISHGIIEMHDLIQEMGQEIVRQECPHYPGKRSRLFKGEESLEVLKKNKGSDAIQGILLNLREIKEVIVHGQTFEKMDNLRMFMLFDYLSYGSRVASSIVTLPDTLKIFYWHGFPQRSLPPNFCPENLVRLEMPYCDLEQLWEEDQSLPKLKRLDLSYSDKLSRIQDLSLSPNIEEIILNDCPKLIKVHSSILLTKLTSLRLDDCHNLNSAIVPSNILSRSPPGCINLSWCGKLEMFSISQTQICYAPPSSSLIGPIFPHVKPRPQRRNFLGPPRILFPENLFRYNVTEISSITFDRYWESDEEKEVTNKICFIDLSNCSSLTIFPFDLSQIKFLNKLCLRDCSKLQNFPEIENTMENLAVLILDGTAIQALPSSLWRLVGLEQLSLRGCKNLEIIPSSIGSLTRLCKLDLTFCESLQTFPSTIFKLKLRKLDLCGCFNLRTFPEITEPAQTLAHINLTHTAVKELPSSFDNLAKLRSLQLNRCTDLESLPNSIVNLKLLCKLDCSECAKLKEIPAHIGSMSSLMELSLSESGIVNLPESIAHLSSLKSLDLSGCKNLECIPQIPPFLKQLVALDCTSIRRVMSNQNLSDSKEGVFKFHFTNAQQLDSNARANIEEDARLRMTHDACRSVFFCFPGTAVPHWFPFRGKGSSVTTNEDLSFCSDDRLIGFALCIVFGVLDTNAIKDRFLYFGYSLKFECDDDGTQIIPNNDELINYFRWGYSYRVLDKDHTFMWKFNLESVRRSGMNLRRLSDARSFTFEISPKACNFLLPDYRSIMTIKECGMCPLYSSGSNVA* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3210 1267 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 158 IPR035897 -
Vra7g3210 1267 Gene3D - 187 339 IPR027417 -
Vra7g3210 1267 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Vra7g3210 1267 Gene3D Ribonuclease Inhibitor 757 897 IPR032675 -
Vra7g3210 1267 SUPERFAMILY L domain-like 482 722 - -
Vra7g3210 1267 Pfam NB-ARC domain 203 420 IPR002182 GO:0043531
Vra7g3210 1267 SUPERFAMILY L domain-like 771 1051 - -
Vra7g3210 1267 Pfam TIR domain 16 182 IPR000157 GO:0007165
Vra7g3210 1267 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 782 869 - -
Vra7g3210 1267 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 719 - -
Vra7g3210 1267 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 855 1150 - -
Vra7g3210 1267 Gene3D - 342 427 IPR042197 -
Vra7g3210 1267 SMART till_3 16 155 IPR000157 GO:0007165
Vra7g3210 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 782 869 IPR044974 GO:0006952
Vra7g3210 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 719 IPR044974 GO:0006952
Vra7g3210 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 855 1150 IPR044974 GO:0006952
Vra7g3210 1267 PRINTS Disease resistance protein signature 215 230 - -
Vra7g3210 1267 PRINTS Disease resistance protein signature 284 298 - -
Vra7g3210 1267 PRINTS Disease resistance protein signature 378 392 - -
Vra7g3210 1267 PRINTS Disease resistance protein signature 1015 1031 - -
Vra7g3210 1267 Gene3D Ribonuclease Inhibitor 517 723 IPR032675 -
Vra7g3210 1267 Gene3D Ribonuclease Inhibitor 900 1062 IPR032675 -
Vra7g3210 1267 Pfam C-JID domain 1107 1262 IPR045344 -
Vra7g3210 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 437 IPR027417 -
Vra7g3210 1267 Gene3D - 14 186 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3210 Vra-Chr7 51696062 51702268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3210 783 952 WRKY Transcription Factor Family AT4G12020 37.572 1.38e-16 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3210 - - var:108318722 1758.81