Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3208 ATGGCTGTCACCTTGGAAGCTGAGAAACAGGGCCTTCTCAATCTCCACACTGAGAAGCACTTCACCGCCGGCAAAGTCGTCCGCGACATCATCATTGGCGTTTCCGACGGCCTCACTGTTCCCTTCGCTCTCGCCGCCGGCCTCTCCGGCACGAATGCCACCTCCGCCATCGTTCTCACTGCCGGCATAGCCGAAGTCGTCGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCAGCGAAAAGTGAAGCGGATCATTACGACAGAGAAGTGAAAAGGGAGCAAGAAGAAATAATAGCCGTGCCAGAAACTGAAGCAGCAGAGGTAGGAGAAATACTAGCTGAGTATGGAATAGAGGCACACGAATATGCACCTGTGGTGAATGCTCTCAGAAAAAACCCTCAGGCATGGCTTGATTTCATGATGAAGTTTGAGCTGGGATTAGAGAAGCCAGATCCAATGAGAGCATTGCACAGTGCAATGACAATTGCTGCTGCTTACATAGTTGGTGGTCTTGTTCCTCTTGCTCCTTACATGTTCATTCCAAGGGCTTCAGAGGCCGTTCTGTTCTCAGTCGTAGTTACCTTAGCTGCATTGCTGATTTTTGGATATGCCAAGGGTTACTTCACTGGTAATAAACCATTCAGGAGTGCTTTTGAAACAGCTCTCATCGGTGCCATCGCCTCTGCAGCAGCTTTTGGTATGGCAAAGGTTTTCAATCCATAG 729 0.5034 MAVTLEAEKQGLLNLHTEKHFTAGKVVRDIIIGVSDGLTVPFALAAGLSGTNATSAIVLTAGIAEVVAGAISMGLGGYLAAKSEADHYDREVKREQEEIIAVPETEAAEVGEILAEYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPMRALHSAMTIAAAYIVGGLVPLAPYMFIPRASEAVLFSVVVTLAALLIFGYAKGYFTGNKPFRSAFETALIGAIASAAAFGMAKVFNP* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3208 242 Coils Coil 78 98 - -
Vra7g3208 242 Pfam VIT family 27 237 IPR008217 GO:0005384|GO:0030026
Vra7g3208 242 CDD CCC1 8 240 - -
Vra7g3208 242 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 241 IPR008217 GO:0005384|GO:0030026
Vra7g3208 242 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 8 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3208 Vra-Chr7 51686663 51691762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3208 13 239 Nodulin-like Gene Family AT3G43660 24.681 1.12e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3208 K22736 - gmx:100814227 400.979