Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3196 ATGGTGACAAGAAGAAAGCTCCTGAATTTGTTATCAGCTCTAAACGTTTCTGACCTACTTCCTCATCACGCCAATGCAATTAACCGTTTTTCGAAAACCCCCAAAACCCTTAGGGTTTATTACGGAACCCAATCATCCAAACTCCCCGAATACGAGATGCCATCGGTAACATGGGGCGTGATCCAAGGTCGCAAGGAGAAGCTCGTTTCGCGAGTAATCATCTTCGACTACCTCAAGGGTTTGGGAATCATCCCGGACGAGTTGCACGACCTCGAACTTCCCTCCACCGTAGACGTCATGCGTGAGCGTGTCGAGTTTCTCCAAAAAATAGGTCTAACCGTCGACGATATCAACAATTACCCTTTGATCTTAGGTTGCAGTGTCAGAAAAAACATGATCCCCGTGTTGGGGTACTTAGAAAAAATTGGGATTGGAAGGCCCAAGCTTGGGGAATTCGTTAAGAATTACCCGCAGGTGTTGCATGCTAGTGTCATTGTTGAGCTTGCTCCTGTTGTTAAGTTCCTCAGGGGCCTTGATGTGGAGAAAGATGATATCGGGTATGTGTTGCAGAAGTACCCTGAACTTCTTGGGTTCAAGCTTGAGGGTACTATGAGCACTTCGGTGGCTTATCTTGTTAGTATTGGAGTGAACCCTAGAGATATCGGTCCAATGGTTACTCAGTATCCTTATTTCTTAGGGATGAGAGTTGGAACTGTGATCAAGCCCTTGATTGATTACTTGGTCGATTTAGGGCTACCGAAGAAGGTTTTGGCTAGGATGTTGGAGAAGAGAGCTTACATTCTTGGCTATGATCTTGAGGAAACTGTGAAACCAAATGTGGAATGTTTGATTAGTTTTGGTGTTAGAAGGGAGTGTTTGGCTTCGGTTATTGCTCAATATCCGCAGATTCTTGGGCTGCCTCTCAAGGCTAAGTTGTCCACGCAGCAGTACTTTTTCAGTTTGAAGCTTAAGGTTGATCCCGAAGGGTTTGCACGGGTGGTGGAGAACATGCCTCAGGTAGTTAGCCTCAACCAGCATGTGATTATGAAGCCCGTTGAGTTCCTCCTTGGAAGGACTGTAACAGTGGAGGATGTAGCTAGAATGGTGATCAAGTGTCCTCAGTTGGTGGCATCGAGAGTTGAGCTGATGAAAAACAGCTATTACTTCTTTAAGAGTGAGATGGGGAGGCCATTGAAAGAGCTTGTGGAATTCCCGGAGTACTTTACTTATAGTTTGGAGTCTAGAATCAAACCCAGATACCAGAGGCTCAAGAGTAAGGGGATAAGATGTTCGTTGAATTGGATGCTGAATTGTAGTGACCAGAGGTTTGAAGAGAGGTTGCAGGGTCATTACATTGAAACTGAAAGTGCAGGTCCCAGATTCTGTATGGGAGGGAAATTGGAGCTACCGGGGAATGACATAATGTCTGATGACGAAGCTGAGAGTGATGATGAAGTACTATACACAAGAACTGTTTCTCTATAG 1485 0.4525 MVTRRKLLNLLSALNVSDLLPHHANAINRFSKTPKTLRVYYGTQSSKLPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELHDLELPSTVDVMRERVEFLQKIGLTVDDINNYPLILGCSVRKNMIPVLGYLEKIGIGRPKLGEFVKNYPQVLHASVIVELAPVVKFLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPLIDYLVDLGLPKKVLARMLEKRAYILGYDLEETVKPNVECLISFGVRRECLASVIAQYPQILGLPLKAKLSTQQYFFSLKLKVDPEGFARVVENMPQVVSLNQHVIMKPVEFLLGRTVTVEDVARMVIKCPQLVASRVELMKNSYYFFKSEMGRPLKELVEFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGHYIETESAGPRFCMGGKLELPGNDIMSDDEAESDDEVLYTRTVSL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3196 494 Gene3D Transcription termination factor 3, mitochondrial 234 454 IPR038538 -
Vra7g3196 494 Gene3D Transcription termination factor 3, mitochondrial 70 167 IPR038538 -
Vra7g3196 494 Pfam mTERF 136 444 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 PANTHER EXPRESSED PROTEIN 36 477 - -
Vra7g3196 494 PANTHER CGI-12 PROTEIN-RELATED 36 477 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 331 361 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 294 326 IPR003690 GO:0003690|GO:0006355
Vra7g3196 494 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3196 Vra-Chr7 51610420 51615615 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra7g3196 mTERF 3.6e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3196 K15032 - gmx:100809590 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3196 7 51610420 51615615 Vra1g0650 1 7658431 7660642 PCT