Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3184 ATGGCCGAAAGTTCTTCTTCAATTGACATGTCTGCCATGCCTAAATTTCCATCAACAAATCTTACTATCCTTGCCATTGATACTGATCTCAAAGTTCTTGAGTTCATCGAGAAATCATGCAACAAGAATTCTCATCAAGCTAAGATATGCTCTGAATCTTCAAATGCGGTCAAACTTTTGGCAGAAAAAGAAATAGACTGTCATTTGATTATCATGGAACTCAATATGCCAGAGATCAATGGCTATGAATTTCTGGAGTTTCTTGATGACGAAGCAATTGATGTTCCTTTCATTATGATGTCTGAGGATCGAACTCTGGCTTCCCAAGAGAAGGCTTTTAGACTTGGAGCTTGCGATTATTGGTTTAAACCCTTATTTAAGTATGAGGTTTTTTTCGAGAAAAATCATTTCTTGTCACCTATGATGCGACATCATATATACTTCAAACGCATAGGGATAAATCTTGATAGCTTGAAAGAAGATGAAAAAGGTGCGTTAGGTTATGATTCTGATGAAGAAGCCGAAGCCAATGATGATAGTCCCCATTCTGATGAAGAAGCCGAAGCTGGTGATAATAGTCCTCGTAAGAAAGAATAG 597 0.3752 MAESSSSIDMSAMPKFPSTNLTILAIDTDLKVLEFIEKSCNKNSHQAKICSESSNAVKLLAEKEIDCHLIIMELNMPEINGYEFLEFLDDEAIDVPFIMMSEDRTLASQEKAFRLGACDYWFKPLFKYEVFFEKNHFLSPMMRHHIYFKRIGINLDSLKEDEKGALGYDSDEEAEANDDSPHSDEEAEAGDNSPRKKE* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3184 198 SMART REC_2 21 135 IPR001789 GO:0000160
Vra7g3184 198 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 197 IPR045279 GO:0009736
Vra7g3184 198 MobiDBLite consensus disorder prediction 171 185 - -
Vra7g3184 198 Gene3D - 18 139 - -
Vra7g3184 198 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 17 197 - -
Vra7g3184 198 Pfam Response regulator receiver domain 23 125 IPR001789 GO:0000160
Vra7g3184 198 ProSiteProfiles Response regulatory domain profile. 22 138 IPR001789 GO:0000160
Vra7g3184 198 MobiDBLite consensus disorder prediction 164 198 - -
Vra7g3184 198 SUPERFAMILY CheY-like 20 131 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3184 Vra-Chr7 51521897 51525349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3184 3 198 Response Regulator Gene Family AT4G16110 25.500 6.46e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g3184 Response_reg 1.4e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3184 - K14491 vra:106765414 394.815